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Functional magnetic resonance imaging (fMRI) is an indispensable tool in modern neuroscience, providing a non-invasive window into whole-brain dynamics at millimeter-scale spatial resolution. However, fMRI is constrained by issues such as…

Image and Video Processing · Electrical Eng. & Systems 2025-09-09 Yamin Li , Ange Lou , Ziyuan Xu , Shengchao Zhang , Shiyu Wang , Dario J. Englot , Soheil Kolouri , Daniel Moyer , Roza G. Bayrak , Catie Chang

Portable low-cost MRI systems have the potential to enable point-of-care and timely MRI diagnosis, and to make this imaging modality available to routine scans and to underdeveloped areas. With simplicity, no maintenance, no power…

Medical Physics · Physics 2018-12-31 Shao Ying Huang , Zhi Hua Ren , Sergei Obruchkov , Jia Gong , Robin Dykstra , Wenwei Yu

Deep neural networks provide unprecedented performance gains in many real world problems in signal and image processing. Despite these gains, future development and practical deployment of deep networks is hindered by their blackbox nature,…

Image and Video Processing · Electrical Eng. & Systems 2020-08-10 Vishal Monga , Yuelong Li , Yonina C. Eldar

Magnetic resonance imaging (MRI) is the standard modality to understand human brain structure and function in vivo (antemortem). Decades of research in human neuroimaging has led to the widespread development of methods and tools to provide…

The ambiguity function is fundamental to radar waveform design, characterizing range and Doppler resolution capabilities. However, its traditional formulation involves non-differentiable operations, preventing integration with…

Signal Processing · Electrical Eng. & Systems 2025-07-01 Marc Bara Iniesta

Backpropagation is the core learning mechanism underlying deep learning. However, whether and how this algorithm is implemented in the brain remains highly debated. In particular, while forward activations of pretrained models reliably map…

Current magnetic resonance imaging (MRI) requires the subject to remain stationary to limit motion artifacts and avoid unwanted field-induced brain stimulation. However, imaging during large-scale motion could enable studies in which motion…

Implicit Neural Representations (INRs) have emerged as a paradigm in knowledge representation, offering exceptional flexibility and performance across a diverse range of applications. INRs leverage multilayer perceptrons (MLPs) to model…

Computer Vision and Pattern Recognition · Computer Science 2025-02-19 Amer Essakine , Yanqi Cheng , Chun-Wun Cheng , Lipei Zhang , Zhongying Deng , Lei Zhu , Carola-Bibiane Schönlieb , Angelica I Aviles-Rivero

Pathological brain appearances may be so heterogeneous as to be intelligible only as anomalies, defined by their deviation from normality rather than any specific pathological characteristic. Amongst the hardest tasks in medical imaging,…

Image and Video Processing · Electrical Eng. & Systems 2021-02-24 Walter Hugo Lopez Pinaya , Petru-Daniel Tudosiu , Robert Gray , Geraint Rees , Parashkev Nachev , Sebastien Ourselin , M. Jorge Cardoso

Mapping human brain activity to natural images offers a new window into vision and cognition, yet current diffusion-based decoders face a core difficulty: most condition directly on fMRI features without analyzing how visual information is…

Computer Vision and Pattern Recognition · Computer Science 2025-11-17 Guowei Zhang , Yun Zhao , Moein Khajehnejad , Adeel Razi , Levin Kuhlmann

Bias field artifacts in magnetic resonance imaging (MRI) scans introduce spatially smooth intensity inhomogeneities that degrade image quality and hinder downstream analysis. To address this challenge, we propose a novel variational…

This work presents novel methods to reduce computational and memory requirements for medical image segmentation with a large number of classes. We curiously observe challenges in maintaining state-of-the-art segmentation performance with…

Computer Vision and Pattern Recognition · Computer Science 2026-01-07 Aaron Kujawa , Thomas Booth , Tom Vercauteren

Fourier-based optical computing operations, such as spatial differentiation, have recently been realized in compact form factors using flat optics. Experimental demonstrations, however, have been limited to coherent light requiring laser…

Optics · Physics 2021-12-07 Xiaomeng Zhang , Benfeng Bai , Hong-Bo Sun , Guofan Jin , Jason Valentine

Tagged MRI enables tracking internal tissue motion non-invasively. It encodes motion by modulating anatomy with periodic tags, which deform along with tissue. However, the entanglement between anatomy, tags and motion poses significant…

Image and Video Processing · Electrical Eng. & Systems 2026-03-03 Zhangxing Bian , Shuwen Wei , Samuel W. Remedios , Junyu Chen , Aaron Carass , Blake E. Dewey , Jerry L. Prince

Image compression and reconstruction are crucial for various digital applications. While contemporary neural compression methods achieve impressive compression rates, the adoption of such technology has been largely hindered by the…

Machine Learning · Computer Science 2025-10-06 Ethan G. Rogers , Cheng Wang

Accurate medical image segmentation requires both long-range contextual reasoning and precise boundary delineation, a task where existing transformer- and diffusion-based paradigms are frequently bottlenecked by quadratic computational…

Computer Vision and Pattern Recognition · Computer Science 2026-04-22 Ahmed Marouane Djouama , Abir Belaala , Abdellah Zakaria Sellam , Salah Eddine Bekhouche , Cosimo Distante , Abdenour Hadid

Presently, Magnetic Resonance Imaging (MRI) magnets must deliver excellent magnetic field (B0) uniformity to achieve optimum image quality. Long magnets can satisfy the homogeneity requirements but require considerable superconducting…

Medical Physics · Physics 2024-02-15 Marina Manso Jimeno , John Thomas Vaughan , Sairam Geethanath

We present a tool for resolution recovery in multimodal clinical magnetic resonance imaging (MRI). Such images exhibit great variability, both biological and instrumental. This variability makes automated processing with neuroimaging…

Image and Video Processing · Electrical Eng. & Systems 2019-09-04 Mikael Brudfors , Yael Balbastre , Parashkev Nachev , John Ashburner

We propose an encoder-decoder framework for the segmentation of blood vessels in retinal images that relies on the extraction of large-scale patches at multiple image-scales during training. Experiments on three fundus image datasets…

Image and Video Processing · Electrical Eng. & Systems 2020-11-26 Björn Browatzki , Jörn-Philipp Lies , Christian Wallraven

Neural networks are trained primarily based on their inputs and outputs, without regard for their internal mechanisms. These neglected mechanisms determine properties that are critical for safety, like (i) transparency; (ii) the absence of…

Machine Learning · Computer Science 2024-12-02 Alex Cloud , Jacob Goldman-Wetzler , Evžen Wybitul , Joseph Miller , Alexander Matt Turner
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