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Patient recruitment remains a major bottleneck in clinical trials, calling for scalable and automated solutions. We present TrialMatchAI, an AI-powered recommendation system that automates patient-to-trial matching by processing…

OutlierDetection.jl is an open-source ecosystem for outlier detection in Julia. It provides a range of high-performance outlier detection algorithms implemented directly in Julia. In contrast to previous packages, our ecosystem enables the…

Machine Learning · Computer Science 2022-11-10 David Muhr , Michael Affenzeller , Anthony D. Blaom

This paper describes MAIA, a Multimodal Automated Interpretability Agent. MAIA is a system that uses neural models to automate neural model understanding tasks like feature interpretation and failure mode discovery. It equips a pre-trained…

Artificial Intelligence · Computer Science 2025-02-13 Tamar Rott Shaham , Sarah Schwettmann , Franklin Wang , Achyuta Rajaram , Evan Hernandez , Jacob Andreas , Antonio Torralba

Frank-Wolfe (FW) algorithms have emerged as an essential class of methods for constrained optimization, especially on large-scale problems. In this paper, we summarize the algorithmic design choices and progress made in the last years of…

In recent years there has been a considerable effort in optimising formal methods for application to code. This has been driven by tools such as CPAChecker, DIVINE, and CBMC. At the same time tools such as Uppaal have been massively…

Software Engineering · Computer Science 2021-08-09 Mitja Kulczynski , Axel Legay , Dirk Nowotka , Danny Bøgsted Poulsen

We describe a framework for solving a broad class of infinite-dimensional linear equations, consisting of almost banded operators, which can be used to resepresent linear ordinary differential equations with general boundary conditions. The…

Numerical Analysis · Mathematics 2014-09-22 Sheehan Olver , Alex Townsend

AnyMOD.jl is a Julia framework for creating large-scale energy system models with multiple periods of capacity expansion. It applies a novel graphbased approach that was developed to address the challenges in modeling high levels of…

Physics and Society · Physics 2022-12-21 Leonard Göke

A numerical framework based on network partition and operator splitting is developed to solve nonlinear differential equations of large-scale dynamic processes encountered in physics, chemistry and biology. Under the assumption that those…

Computational Physics · Physics 2018-01-22 Shucheng Pan , Jianhang Wang , Xiangyu Hu , Nikolaus A. Adams

Linear programming (LP) is an extremely useful tool and has been successfully applied to solve various problems in a wide range of areas, including operations research, engineering, economics, or even more abstract mathematical areas such…

Data Structures and Algorithms · Computer Science 2020-03-19 Agniva Chowdhury , Palma London , Haim Avron , Petros Drineas

In this article, we propose an interval constraint programming method for globally solving catalog-based categorical optimization problems. It supports catalogs of arbitrary size and properties of arbitrary dimension, and does not require…

Optimization and Control · Mathematics 2024-01-23 Charlie Vanaret

This paper introduces the algorithmic design and implementation of Tulip, an open-source interior-point solver for linear optimization. It implements a regularized homogeneous interior-point algorithm with multiple centrality corrections,…

Optimization and Control · Mathematics 2022-04-04 Miguel F. Anjos , Andrea Lodi , Mathieu Tanneau

The difficulty of the information extraction task lies in dealing with the task-specific label schemas and heterogeneous data structures. Recent work has proposed methods based on large language models to uniformly model different…

Computation and Language · Computer Science 2024-04-03 Xinglin Xiao , Yijie Wang , Nan Xu , Yuqi Wang , Hanxuan Yang , Minzheng Wang , Yin Luo , Lei Wang , Wenji Mao , Daniel Zeng

The increasing integration of machine learning across various domains has underscored the necessity for accessible systems that non-experts can utilize effectively. To address this need, the field of automated machine learning (AutoML) has…

Human-Computer Interaction · Computer Science 2024-10-24 Amr Gomaa , Michael Sargious , Antonio Krüger

Computer-Using Agents (CUAs) aim to autonomously operate computer systems to complete real-world tasks. However, existing agentic systems remain difficult to scale and lag behind human performance. A key limitation is the absence of…

Optical computing systems provide an alternate hardware model which appears to be aligned with the demands of neural network workloads. However, the challenge of implementing energy efficient nonlinearities in optics -- a key requirement…

Optics · Physics 2025-08-04 N. Richardson , C. Bosch , R. P. Adams

We present Reelay, a unified online temporal logic monitoring framework designed for the rigorous analysis and runtime verification of cyber-physical systems. Reelay addresses the fragmentation of existing logical formalisms and tools by…

Logic in Computer Science · Computer Science 2026-04-27 Dogan Ulus

Computational Workflows are widely used in data analysis, enabling innovation and decision-making. In many domains (bioinformatics, image analysis, & radio astronomy) the analysis components are numerous and written in multiple different…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-05-24 Michael R. Crusoe , Sanne Abeln , Alexandru Iosup , Peter Amstutz , John Chilton , Nebojša Tijanić , Hervé Ménager , Stian Soiland-Reyes , Bogdan Gavrilovic , Carole Goble

In this letter, a new filtering technique to solve a nonlinear state estimation problem has been developed. It is well known that for a nonlinear system, the prior and posterior probability density functions (pdf) are non-Gaussian in…

Signal Processing · Electrical Eng. & Systems 2019-12-03 Kundan Kumar , Shovan Bhaumik

Elimination of unknowns in a system of differential equations is often required when analysing (possibly nonlinear) dynamical systems models, where only a subset of variables are observable. One such analysis, identifiability, often relies…

Algebraic Geometry · Mathematics 2022-11-28 Ruiwen Dong , Christian Goodbrake , Heather A Harrington , Gleb Pogudin

Accurate and efficient methods to simulate nonadiabatic and quantum nuclear effects in high-dimensional and dissipative systems are crucial for the prediction of chemical dynamics in condensed phase. To facilitate effective development,…