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Related papers: Stop Misusing t-SNE and UMAP for Visual Analytics

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Neighbour embeddings (NE) allow the representation of high dimensional datasets into lower dimensional spaces and are often used in data visualisation. In practice, accelerated approximations are employed to handle very large datasets.…

Machine Learning · Computer Science 2025-09-10 Pierre Lambert , Edouard Couplet , Michel Verleysen , John Aldo Lee

Multidimensional scaling is a statistical process that aims to embed high dimensional data into a lower-dimensional space; this process is often used for the purpose of data visualisation. Common multidimensional scaling algorithms tend to…

Machine Learning · Computer Science 2022-02-25 Pierre Lambert , Cyril de Bodt , Michel Verleysen , John Lee

Evaluating the accuracy of dimensionality reduction (DR) projections in preserving the structure of high-dimensional data is crucial for reliable visual analytics. Diverse evaluation metrics targeting different structural characteristics…

Machine Learning · Computer Science 2026-01-13 Jiyeon Bae , Hyeon Jeon , Jinwook Seo

Scientists in many fields have the common and basic need of dimensionality reduction: visualizing the underlying structure of the massive multivariate data in a low-dimensional space. However, many dimensionality reduction methods confront…

Machine Learning · Statistics 2015-03-19 Teng Qiu , Yongjie Li

The t-distributed Stochastic Neighbor Embedding (t-SNE) algorithm is a ubiquitously employed dimensionality reduction (DR) method. Its non-parametric nature and impressive efficacy motivated its parametric extension. It is however bounded…

Machine Learning · Computer Science 2020-10-06 Francesco Crecchi , Cyril de Bodt , Michel Verleysen , John A. Lee , Davide Bacciu

Dimension reduction, widely used in science, maps high-dimensional data into low-dimensional space. We investigate a basic mathematical model underlying the techniques of stochastic neighborhood embedding (SNE) and its popular variant…

Machine Learning · Statistics 2025-03-26 Ben Weinkove

Dimensionality Reduction (DR) methods are widely used to visualize high-dimensional data. One key task in DR-based analysis is discovering neighborhoods, which relies on analyzing the fine-grained local structure of a projection. However,…

Machine Learning · Computer Science 2026-05-25 Diede P. M. van der Hoorn , Alessio Arleo , Fernando V. Paulovich

Dimensionality reduction algorithms are often used to visualise high-dimensional data. Previously, studies have used prior information to enhance or suppress expected patterns in projections. In this paper, we adapt such techniques for…

Machine Learning · Computer Science 2024-05-16 Daniel M. Bot , Jan Aerts

In this paper, we present DendroMap, a novel approach to interactively exploring large-scale image datasets for machine learning (ML). ML practitioners often explore image datasets by generating a grid of images or projecting…

Human-Computer Interaction · Computer Science 2022-08-16 Donald Bertucci , Md Montaser Hamid , Yashwanthi Anand , Anita Ruangrotsakun , Delyar Tabatabai , Melissa Perez , Minsuk Kahng

The rapid adoption of generative AI has driven an explosion in the size of datasets consumed and produced by AI models. Traditional methods for unstructured data visualization, such as t-SNE and UMAP, have not kept up with the pace of…

Machine Learning · Computer Science 2025-05-22 Brandon Duderstadt , Zach Nussbaum , Laurens van der Maaten

Analyzing and visualizing scientific ensemble datasets with high dimensionality and complexity poses significant challenges. Dimensionality reduction techniques and autoencoders are powerful tools for extracting features, but they often…

Machine Learning · Computer Science 2026-01-19 Hamid Gadirov , Lennard Manuel , Steffen Frey

Deep neural networks (DNNs) are susceptible to universal adversarial perturbations (UAPs). These perturbations are meticulously designed to fool the target model universally across all sample classes. Unlike instance-specific adversarial…

Machine Learning · Computer Science 2025-04-17 Yechao Zhang , Yingzhe Xu , Junyu Shi , Leo Yu Zhang , Shengshan Hu , Minghui Li , Yanjun Zhang

Diffusion maps (DMAP) are often used as a dimensionality-reduction tool, but more precisely they provide a spectral representation of the intrinsic geometry rather than a complete charting method. To illustrate this distinction, we study a…

Machine Learning · Computer Science 2026-03-31 Julio Candanedo , Alejandro Patiño

We introduce an improved unsupervised clustering protocol specially suited for large-scale structured data. The protocol follows three steps: a dimensionality reduction of the data, a density estimation over the low dimensional…

Machine Learning · Computer Science 2019-11-05 Joan Garriga , Frederic Bartumeus

Sharpened dimensionality reduction (SDR), which belongs to the class of multidimensional projection techniques, has recently been introduced to tackle the challenges in the exploratory and visual analysis of high-dimensional data. SDR has…

Computer Vision and Pattern Recognition · Computer Science 2022-02-24 Jeewon Heo , Youngjoo Kim , Jos B. T. M. Roerdink

Dimensionality reduction techniques are widely used for visualizing high-dimensional data in two dimensions. Existing methods are typically designed to preserve either local (e.g., $t$-SNE, UMAP) or global (e.g., MDS, PCA) structure of the…

Machine Learning · Computer Science 2026-02-02 Noël Kury , Dmitry Kobak , Sebastian Damrich

Accurate urban maps provide essential information to support sustainable urban development. Recent urban mapping methods use multi-modal deep neural networks to fuse Synthetic Aperture Radar (SAR) and optical data. However, multi-modal…

Computer Vision and Pattern Recognition · Computer Science 2023-04-12 Sebastian Hafner , Yifang Ban , Andrea Nascetti

Although distance measures are used in many machine learning algorithms, the literature on the context-independent selection and evaluation of distance measures is limited in the sense that prior knowledge is used. In cluster analysis,…

Machine Learning · Computer Science 2021-08-24 Michael C. Thrun

Low-dimensional embedding techniques such as tSNE and UMAP allow visualizing high-dimensional data and therewith facilitate the discovery of interesting structure. Although they are widely used, they visualize data as is, rather than in…

Machine Learning · Computer Science 2021-03-03 Edith Heiter , Jonas Fischer , Jilles Vreeken

The optimization of electric machines at multiple operating points is crucial for applications that require frequent changes on speeds and loads, such as the electric vehicles, to strive for the machine optimal performance across the entire…

Machine Learning · Computer Science 2019-11-05 Shen Zhang , Shibo Zhang , Sufei Li , Liang Du , Thomas G. Habetler
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