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Large language models (LLMs) showcase increasingly impressive English benchmark scores, however their performance profiles remain inconsistent across multilingual settings. To address this gap, we introduce PolyPrompt, a novel,…

Computation and Language · Computer Science 2025-06-04 Nathan Roll

As hypothesis generation becomes increasingly automated, a new bottleneck has emerged: hypothesis assessment. Modern systems can surface thousands of statistical relationships-correlations, trends, causal links-but offer little guidance on…

Machine Learning · Computer Science 2025-06-05 Yue Gong , Raul Castro Fernandez

Real-world multimodal applications often require any-to-any capabilities, enabling both understanding and generation across modalities including text, image, audio, and video. However, integrating the strengths of autoregressive language…

Machine Learning · Computer Science 2025-08-15 Jiulin Li , Ping Huang , Yexin Li , Shuo Chen , Juewen Hu , Ye Tian

A key challenge in artificial intelligence is the creation of systems capable of autonomously advancing scientific understanding by exploring novel domains, identifying complex patterns, and uncovering previously unseen connections in vast…

Artificial Intelligence · Computer Science 2024-09-10 Alireza Ghafarollahi , Markus J. Buehler

Inductive reasoning is a core problem-solving capacity: humans can identify underlying principles from a few examples, which robustly generalize to novel scenarios. Recent work evaluates large language models (LLMs) on inductive reasoning…

Machine Learning · Computer Science 2024-06-03 Ruocheng Wang , Eric Zelikman , Gabriel Poesia , Yewen Pu , Nick Haber , Noah D. Goodman

Argument mining is to analyze argument structure and extract important argument information from unstructured text. An argument mining system can help people automatically gain causal and logical information behind the text. As…

Computation and Language · Computer Science 2023-09-19 Lang Cao

A number of flexible tactic-based logical frameworks are nowadays available that can implement a wide range of mathematical theories using a common higher-order metalanguage. Used as proof assistants, one of the advantages of such powerful…

Logic in Computer Science · Computer Science 2010-03-26 João Marcos

Clinical trials are critical for drug development. Constructing the appropriate eligibility criteria (i.e., the inclusion/exclusion criteria for patient recruitment) is essential for the trial's success. Proper design of clinical trial…

Computation and Language · Computer Science 2023-10-10 Zifeng Wang , Cao Xiao , Jimeng Sun

Uncovering the opacity of diffusion-based generative models is urgently needed, as their applications continue to expand while their underlying procedures largely remain a black box. With a critical question -- how can the diffusion…

Computer Vision and Pattern Recognition · Computer Science 2026-02-04 Nina Weng , Aasa Feragen , Siavash Bigdeli

Recent advances in large language models (LLMs) have accelerated research on automated optimization modeling. While real-world decision-making is inherently uncertain, most existing work has focused on deterministic optimization with known…

Machine Learning · Computer Science 2025-11-18 WenZhuo Zhu , Zheng Cui , Wenhan Lu , Sheng Liu , Yue Zhao

Data-driven scientific discovery requires the iterative integration of scientific domain knowledge, statistical expertise, and an understanding of data semantics to make nuanced analytical decisions, e.g., about which variables,…

An effective multi-turn instruction-following assistant can be developed by creating a simulator that can generate useful interaction data. Apart from relying on its intrinsic weights, an ideal user simulator should also be able to…

Human-Computer Interaction · Computer Science 2024-01-31 Kaustubh D. Dhole

Causal discovery in multi-omic datasets is crucial for understanding the bigger picture of gene regulatory mechanisms, but remains challenging due to high dimensionality, differentiation of direct from indirect relationships, and hidden…

Genomics · Quantitative Biology 2025-05-23 Stephen Asiedu , David Watson

Despite the wealth of single-cell multi-omics data, it remains challenging to predict the consequences of novel genetic and chemical perturbations in the human body. It requires knowledge of molecular interactions at all biological levels,…

Artificial Intelligence · Computer Science 2025-01-22 You Wu , Lei Xie

The past decade's "cryoEM revolution" has produced exponential growth in high-resolution structural data through advances in cryogenic electron microscopy (cryoEM) and tomography (cryoET). Deep learning integration into structural…

Quantitative Methods · Quantitative Biology 2025-07-29 Brady K. Zhou , Jason J. Hu , Jane K. J. Lee , Z. Hong Zhou , Demetri Terzopoulos

The ubiquitous use of machine learning algorithms brings new challenges to traditional database problems such as incremental view update. Much effort is being put in better understanding and debugging machine learning models, as well as in…

Machine Learning · Computer Science 2020-02-28 Yinjun Wu , Val Tannen , Susan B. Davidson

Abstract. When writing an academic paper, researchers often spend considerable time reviewing and summarizing papers to extract relevant citations and data to compose the Introduction and Related Work sections. To address this problem, we…

Information Retrieval · Computer Science 2023-06-22 Juan Ramirez-Orta , Eduardo Xamena , Ana Maguitman , Axel J. Soto , Flavia P. Zanoto , Evangelos Milios

We consider enhancing large language models (LLMs) for complex planning tasks. While existing methods allow LLMs to explore intermediate steps to make plans, they either depend on unreliable self-verification or external verifiers to…

Artificial Intelligence · Computer Science 2025-02-27 Hongyi Ling , Shubham Parashar , Sambhav Khurana , Blake Olson , Anwesha Basu , Gaurangi Sinha , Zhengzhong Tu , James Caverlee , Shuiwang Ji

The rapid advancement in capabilities of large language models (LLMs) raises a pivotal question: How can LLMs accelerate scientific discovery? This work tackles the crucial first stage of research, generating novel hypotheses. While recent…

Artificial Intelligence · Computer Science 2025-05-27 Aniketh Garikaparthi , Manasi Patwardhan , Lovekesh Vig , Arman Cohan

Attention-based models trained on protein sequences have demonstrated incredible success at classification and generation tasks relevant for artificial intelligence-driven protein design. However, we lack a sufficient understanding of how…

Machine Learning · Computer Science 2022-06-29 Erik Nijkamp , Jeffrey Ruffolo , Eli N. Weinstein , Nikhil Naik , Ali Madani