English
Related papers

Related papers: Automating Exploratory Multiomics Research via Lan…

200 papers

We present PREMISE (PREdict with Matching ScorEs), a new architecture for the matching-based learning in the multimodal fields for the multimodal review helpfulness (MRHP) task. Distinct to previous fusion-based methods which obtains…

Computation and Language · Computer Science 2025-05-05 Wei Han , Hui Chen , Soujanya Poria

Drug discovery remains a formidable challenge: more than 90 percent of candidate molecules fail in clinical evaluation, and development costs often exceed one billion dollars per approved therapy. Disparate data streams, from genomics and…

Artificial Intelligence · Computer Science 2025-04-28 Kevin Song , Andrew Trotter , Jake Y. Chen

Our proposed system FAMULUS helps students learn to diagnose based on automatic feedback in virtual patient simulations, and it supports instructors in labeling training data. Diagnosing is an exceptionally difficult skill to obtain but…

Significant scientific discoveries have driven the progress of human civilisation. The explosion of scientific literature and data has created information barriers across disciplines that have slowed the pace of scientific discovery. Large…

Computation and Language · Computer Science 2023-11-13 Biqing Qi , Kaiyan Zhang , Haoxiang Li , Kai Tian , Sihang Zeng , Zhang-Ren Chen , Bowen Zhou

Large Language Models (LLMs) have demonstrated significant potential in generating mathematical proofs. However, a persistent challenge is that LLMs occasionally make mistakes, while even a minor mistake can invalidate an entire proof.…

Logic in Computer Science · Computer Science 2025-03-10 David Yin , Jing Gao

To retrieve and compare scientific data of simulations and experiments in materials science, data needs to be easily accessible and machine readable to qualify and quantify various materials science phenomena. The recent progress in open…

Materials Science · Physics 2025-03-25 Balduin Katzer , Steffen Klinder , Katrin Schulz

Complex chemical space and limited knowledge scope with biases holds immense challenge for human scientists, yet in automated materials discovery. Existing intelligent methods relies more on numerical computation, leading to inefficient…

Machine Learning · Computer Science 2025-04-15 Zheyuan Lai , Yingming Pu

Research waste in biomedical science is driven by redundant studies, incomplete reporting, and the limited scalability of traditional evidence synthesis workflows. We present an AI co-scientist for scalable and transparent knowledge…

Artificial Intelligence · Computer Science 2026-01-21 Arya Rahgozar , Pouria Mortezaagha

Automated theorem provers and formal proof assistants are general reasoning systems that are in theory capable of proving arbitrarily hard theorems, thus solving arbitrary problems reducible to mathematics and logical reasoning. In…

Artificial Intelligence · Computer Science 2025-06-23 Lasse Blaauwbroek , David Cerna , Thibault Gauthier , Jan Jakubův , Cezary Kaliszyk , Martin Suda , Josef Urban

Identifying potential drug targets using metabolic modeling requires integrating multiple modeling methods and heterogenous biological datasets, which can be challenging without sophisticated tools. We developed COMO, a user-friendly…

This research was focused on the efficient collection of experimental Metal-Organic Framework (MOF) data from scientific literature to address the challenges of accessing hard-to-find data and improving the quality of information available…

Materials Science · Physics 2024-04-23 Wonseok Lee , Yeonghun Kang , Taeun Bae , Jihan Kim

Discovering meaningful insights from a large dataset, known as Exploratory Data Analysis (EDA), is a challenging task that requires thorough exploration and analysis of the data. Automated Data Exploration (ADE) systems use goal-oriented…

Artificial Intelligence · Computer Science 2024-10-22 Abhijit Manatkar , Ashlesha Akella , Parthivi Gupta , Krishnasuri Narayanam

We apply foundation models to data discovery and exploration tasks. Foundation models include large language models (LLMs) that show promising performance on a range of diverse tasks unrelated to their training. We show that these models…

Databases · Computer Science 2024-04-09 Moe Kayali , Anton Lykov , Ilias Fountalis , Nikolaos Vasiloglou , Dan Olteanu , Dan Suciu

Unbiased, label-free proteomics is becoming a powerful technique for measuring protein expression in almost any biological sample. The output of these measurements after preprocessing is a collection of features and their associated…

This research paper outlines the development and implementation of a novel Clinical Decision Support System (CDSS) that integrates AI predictive modeling with medical knowledge bases. It utilizes the quantifiable information elements in lab…

Artificial Intelligence · Computer Science 2026-03-17 Muhammad Hammad Maqsood , Mubashir Sajid , Khubaib Ahmed , Muhammad Usamah Shahid , Muddassar Farooq

A main challenge of data-driven sciences is how to make maximal use of the progressively expanding databases of experimental datasets in order to keep research cumulative. We introduce the idea of a modeling-based dataset retrieval engine…

Quantitative Methods · Quantitative Biology 2015-06-19 Ali Faisal , Jaakko Peltonen , Elisabeth Georgii , Johan Rung , Samuel Kaski

As the availability of omics data has increased in the last few years, more multi-omics data have been generated, that is, high-dimensional molecular data consisting of several types such as genomic, transcriptomic, or proteomic data, all…

Genomics · Quantitative Biology 2023-02-09 Roman Hornung , Frederik Ludwigs , Jonas Hagenberg , Anne-Laure Boulesteix

Multi-relational databases are the basis of most consolidated data collections in science and industry today. Most learning and mining algorithms, however, require data to be represented in a propositional form. While there is a variety of…

Machine Learning · Computer Science 2025-03-27 Lukas Pensel , Stefan Kramer

Large language models (LLMs) show promise for automated code optimization. However, without performance context, they struggle to produce correct and effective code transformations. Existing performance tools can identify bottlenecks but…

Performance · Computer Science 2026-04-28 Mohammad Zaeed , Tanzima Z. Islam , Vladimir Indic

This paper presents a complete explainable system that interprets a set of data, abstracts the underlying features and describes them in a natural language of choice. The system relies on two crucial stages: (i) identifying emerging…

Logic in Computer Science · Computer Science 2025-02-14 Flavio Bertini , Alessandro Dal Palù , Federica Zaglio , Francesco Fabiano , Andrea Formisano
‹ Prev 1 4 5 6 7 8 10 Next ›