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Related papers: A note on metapopulation models

200 papers

Aggregated metapopulation lifetime statistics has been used to access stylized facts that might help identify the underlying patch-level dynamics. For instance, the emergence of scaling laws in the aggregated probability distribution of…

Populations and Evolution · Quantitative Biology 2019-09-10 E. H. Colombo

Mosquito-borne diseases cause significant public health burden, mostly in tropical and sub-tropical regions, and are widely emerging or re-emerging in areas where previously absent. Understanding, predicting, and mitigating the spread of…

Quantitative Methods · Quantitative Biology 2017-01-19 Carrie A. Manore , Kyle S. Hickmann , James M. Hyman , Ivo M. Foppa , Justin K. Davis , Dawn M. Wesson , Christopher N. Mores

We introduce a new quantity known as the network heterogeneity index, denoted by $\mathcal{H}$, which facilitates the investigation of disease propagation and population persistence in heterogeneous environments. Our mathematical analysis…

Populations and Evolution · Quantitative Biology 2024-10-15 Poroshat Yazdanbakhsh , Mark Anderson , Zhisheng Shuai

We generalize the Susceptible-Infected-Removed model for epidemics to take into account generic effects of heterogeneity in the degree of susceptibility to infection in the population. We introduce a single new parameter corresponding to a…

Populations and Evolution · Quantitative Biology 2021-01-27 Jonas Neipel , Jonathan Bauermann , Stefano Bo , Tyler Harmon , Frank Jülicher

A stochastic epidemic model is defined in which each individual belongs to a household, a secondary grouping (typically school or workplace) and also the community as a whole. Moreover, infectious contacts take place in these three settings…

Applications · Statistics 2009-08-17 Tom Britton , Theodore Kypraios , Philip O'Neill

A common theme among the proposed models for network epidemics is the assumption that the propagating object, i.e., a virus or a piece of information, is transferred across the nodes without going through any modification or evolution.…

Physics and Society · Physics 2019-11-05 Rashad Eletreby , Yong Zhuang , Kathleen M. Carley , Osman Yağan , H. Vincent Poor

We develop a general modelling framework for compartmental epidemiological systems structured by continuous variables which are linked to the levels of expression of compartment-specific traits. We start by formulating an individual-based…

Populations and Evolution · Quantitative Biology 2025-08-14 Emanuele Bernardi , Tommaso Lorenzi , Mattia Sensi , Andrea Tosin

The interaction among spreading processes on a complex network is a nontrivial phenomenon of great importance. It has recently been realized that cooperative effects among infective diseases can give rise to qualitative changes in the…

Physics and Society · Physics 2020-02-25 Byungjoon Min , Claudio Castellano

It is essential to understand the dynamics of epidemics in the presence of coexisting pathogens. There are various phenomenon that can effect the dynamics. In this paper, we formulate a mathematical model using different assumptions to…

Populations and Evolution · Quantitative Biology 2021-11-02 S. Ghersheen , V. Kozlov , U. Wennergren

Epidemic models are always simplifications of real world epidemics. Which real world features to include, and which simplifications to make, depend both on the disease of interest and on the purpose of the modelling. In the present paper we…

Probability · Mathematics 2008-12-19 Tom Britton , David Lindenstrand

We explore how heterogeneity in the intensity of interactions between people affects epidemic spreading. For that, we study the susceptible-infected-susceptible model on a complex network, where a link connecting individuals $i$ and $j$ is…

Physics and Society · Physics 2013-08-28 C. Buono , F. Vazquez , P. A. Macri , L. A. Braunstein

Human mobility and activity patterns mediate contagion on many levels, including the spatial spread of infectious diseases, diffusion of rumors, and emergence of consensus. These patterns however are often dominated by specific locations…

Physics and Society · Physics 2011-07-05 Duygu Balcan , Alessandro Vespignani

Transportation networks play a critical part in the spread of infectious diseases between populations. In this work, we define a networked susceptible-exposed-infected-recovered epidemic process with loss of immunity over time (SEIRS) that…

Optimization and Control · Mathematics 2023-09-22 Brooks A. Butler , Raphael Stern , Philip E. Paré

Classical disease models use a mass action term as the interaction between infected and susceptible people in separate patches. We derive the equations when this interaction is a migration of people between patches. The results model what…

Biological Physics · Physics 2009-11-11 Larry S. Liebovitch , Ira B. Schwartz

The spreading dynamics of an epidemic and the collective behavioral pattern of the population over which it spreads are deeply intertwined and the latter can critically shape the outcome of the former. Motivated by this, we design a…

Populations and Evolution · Quantitative Biology 2021-08-25 Mengbin Ye , Lorenzo Zino , Alessandro Rizzo , Ming Cao

Testing individuals for pathogens can affect the spread of epidemics. Understanding how individual-level processes of sampling and reporting test results can affect community- or population-level spread is a dynamical modeling question. The…

Populations and Evolution · Quantitative Biology 2021-07-20 Ali Gharouni , F. M. Abdelmalek , David J. D. Earn , Jonathan Dushoff , Benjamin M. Bolker

Most population models assume that individuals within a given population are identical, that is, the fundamental role of variation is ignored. Here we develop a general approach to modeling heterogeneous populations with discrete…

Populations and Evolution · Quantitative Biology 2007-05-23 Georgy P. Karev , Artem S. Novozhilov , Faina S. Berezovskaya

Metapopulation epidemic models are a valuable tool for studying large-scale outbreaks. With the limited availability of epidemic tracing data, it is challenging to infer the essential constituents of these models, namely, the epidemic…

Machine Learning · Computer Science 2026-03-04 Xin Li , Jonathan Cohen , Shai Pilosof , Rami Puzis

We introduce and analyze coupled, multi-strain epidemic models designed to simulate the emergence and dissemination of mutant (e.g. drug-resistant) pathogen strains. In particular, we investigate the mathematical and biological properties…

Populations and Evolution · Quantitative Biology 2017-05-10 Michael T. Meehan , Daniel G. Cocks , James M. Trauer , Emma S. McBryde

Stochasticity and spatial heterogeneity are of great interest recently in studying the spread of an infectious disease. The presented method solves an inverse problem to discover the effectively decisive topology of a heterogeneous network…

Artificial Intelligence · Computer Science 2015-03-13 Yoshiharu Maeno