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One of the most challenging aspects of medical image analysis is the lack of a high quantity of annotated data. This makes it difficult for deep learning algorithms to perform well due to a lack of variations in the input space. While…

Computer Vision and Pattern Recognition · Computer Science 2020-03-13 Soumyajyoti Dey , Soham Das , Swarnendu Ghosh , Shyamali Mitra , Sukanta Chakrabarty , Nibaran Das

Self-evolution methods enhance code generation through iterative "generate-verify-refine" cycles, yet existing approaches suffer from low exploration efficiency, failing to discover solutions with superior complexity within limited budgets.…

Computation and Language · Computer Science 2026-02-13 Tu Hu , Ronghao Chen , Shuo Zhang , Jianghao Yin , Mou Xiao Feng , Jingping Liu , Shaolei Zhang , Wenqi Jiang , Yuqi Fang , Sen Hu , Huacan Wang , Yi Xu

With recent advances in reverse engineering, attackers can reconstruct a netlist to counterfeit chips by opening the die and scanning all layers of authentic chips. This relatively easy counterfeiting is made possible by the use of the…

Cryptography and Security · Computer Science 2020-03-03 Grace Li Zhang , Bing Li , Meng Li , Bei Yu , David Z. Pan , Michaela Brunner , Georg Sigl , Ulf Schlichtmann

Quantum computing leverages the unique properties of qubits and quantum parallelism to solve problems intractable for classical systems, offering unparalleled computational potential. However, the optimization of quantum circuits remains…

The importance of general matrix multiplication (GEMM) is motivating new instruction set extensions for multiplying dense matrices in almost all contemporary ISAs, and these extensions are often implemented using high-performance systolic…

Hardware Architecture · Computer Science 2025-02-18 Tuan Ta , Joshua Randall , Christopher Batten

We adapt a well known streaming algorithm for approximating item frequencies to the matrix sketching setting. The algorithm receives the rows of a large matrix $A \in \R^{n \times m}$ one after the other in a streaming fashion. It maintains…

Data Structures and Algorithms · Computer Science 2012-07-12 Edo Liberty

Single-cell RNA-seq data allow the quantification of cell type differences across a growing set of biological contexts. However, pinpointing a small subset of genomic features explaining this variability can be ill-defined and…

Machine Learning · Statistics 2022-07-29 Nabeel Sarwar , Wilson Gregory , George A Kevrekidis , Soledad Villar , Bianca Dumitrascu

General Sparse Matrix-Matrix Multiplication (SpGEMM) has attracted much attention from researchers in graph analyzing, scientific computing, and deep learning. Many optimization techniques have been developed for different applications and…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-12 Jianhua Gao , Weixing Ji , Fangli Chang , Shiyu Han , Bingxin Wei , Zeming Liu , Yizhuo Wang

Sparse general matrix multiplication (SpGEMM) is an important and expensive computation primitive in many real-world applications. Due to SpGEMM's inherent irregularity and the vast diversity of its input matrices, developing…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-16 Zhaoyang Du , Yijin Guan , Tianchan Guan , Dimin Niu , Linyong Huang , Hongzhong Zheng , Yuan Xie

The job sequencing and tool switching problem (SSP) has been extensively studied in the field of operations research, due to its practical relevance and methodological interest. Given a machine that can load a limited amount of tools…

Neural and Evolutionary Computing · Computer Science 2019-10-23 Jordana Mecler , Anand Subramanian , Thibaut Vidal

Compiler pass auto-tuning is critical for enhancing software performance, yet finding the optimal pass sequence for a specific program is an NP-hard problem. Traditional, general-purpose optimization flags like -O3 and -Oz adopt a…

Software Engineering · Computer Science 2025-10-17 Haolin Pan , Hongbin Zhang , Mingjie Xing , Yanjun Wu

Sparse matrix-matrix multiplication (SpGEMM) is a critical operation in numerous fields, including scientific computing, graph analytics, and deep learning. These applications exploit the sparsity of matrices to reduce storage and…

Machine Learning · Computer Science 2024-08-30 Sanjali Yadav , Bahar Asgari

Computer networks are hard to manage. Given a set of high-level requirements (e.g., reachability, security), operators have to manually figure out the individual configuration of potentially hundreds of devices running complex distributed…

Networking and Internet Architecture · Computer Science 2017-05-31 Ahmed El-Hassany , Petar Tsankov , Laurent Vanbever , Martin Vechev

Improving information flow in deep networks helps to ease the training difficulties and utilize parameters more efficiently. Here we propose a new convolutional neural network architecture with alternately updated clique (CliqueNet). In…

Computer Vision and Pattern Recognition · Computer Science 2018-04-04 Yibo Yang , Zhisheng Zhong , Tiancheng Shen , Zhouchen Lin

Summary: Mapping ancient DNA to a reference genome is challenging as it involves numerous steps, is time-consuming and has to be repeated within a study to assess the quality of extracts and libraries; as a result, the mapping needs to be…

Program synthesis aims to {\it automatically} find programs from an underlying programming language that satisfy a given specification. While this has the potential to revolutionize computing, how to search over the vast space of programs…

Neural and Evolutionary Computing · Computer Science 2022-03-01 Yuan Yuan , Wolfgang Banzhaf

Predicting future interactions or novel links in networks is an indispensable tool across diverse domains, including genetic research, online social networks, and recommendation systems. Among the numerous techniques developed for link…

Social and Information Networks · Computer Science 2025-03-24 Maja Lindström , Christopher Blöcker , Tommy Löfstedt , Martin Rosvall

We present a new program synthesis approach that combines an encoder-decoder based synthesis architecture with a differentiable program fixer. Our approach is inspired from the fact that human developers seldom get their program correct on…

Machine Learning · Statistics 2020-06-22 Matej Balog , Rishabh Singh , Petros Maniatis , Charles Sutton

The automatic generation of computer programs is one of the main applications with practical relevance in the field of evolutionary computation. With program synthesis techniques not only software developers could be supported in their…

Neural and Evolutionary Computing · Computer Science 2021-08-30 Dominik Sobania , Dirk Schweim , Franz Rothlauf

In this paper we introduce Shackleton as a generalized framework enabling the application of linear genetic programming -- a technique under the umbrella of evolutionary algorithms -- to a variety of use cases. We also explore here a novel…

Neural and Evolutionary Computing · Computer Science 2022-02-01 Hannah Peeler , Shuyue Stella Li , Andrew N. Sloss , Kenneth N. Reid , Yuan Yuan , Wolfgang Banzhaf