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Large Language Models (LLMs) demonstrate exceptional capabilities across various tasks, but their deployment is constrained by high computational and memory costs. Model pruning provides an effective means to alleviate these demands.…

Computation and Language · Computer Science 2025-12-16 Hao Zhang , Mengsi Lyu , Zhuo Chen , Xingrun Xing , Yulong Ao , Yonghua Lin

Individualized therapy is driven forward by medical data analysis, which provides insight into the patient's context. In particular, for Type 1 Diabetes (T1D), which is an autoimmune disease, relationships between demographics, sensor data,…

Signal Processing · Electrical Eng. & Systems 2026-04-23 Beyza Cinar , Maria Maleshkova

Augmentation is an effective alternative to utilize the small amount of labeled protein data. However, most of the existing work focuses on design-ing new architectures or pre-training tasks, and relatively little work has studied data…

Quantitative Methods · Quantitative Biology 2024-03-05 Rui Sun , Lirong Wu , Haitao Lin , Yufei Huang , Stan Z. Li

Although post-training quantization (PTQ) provides an efficient numerical compression scheme for deploying large language models (LLMs) on resource-constrained devices, the representativeness and universality of calibration data remain a…

Machine Learning · Computer Science 2026-01-19 Haiyang Xiao , Weiqing Li , Jinyue Guo , Guochao Jiang , Guohua Liu , Yuewei Zhang

Teledermatology has become a widely accepted communication method in daily clinical practice, enabling remote care while showing strong agreement with in-person visits. Poor image quality remains an unsolved problem in teledermatology and…

Image and Video Processing · Electrical Eng. & Systems 2025-06-26 Ignacio Hernández Montilla , Alfonso Medela , Paola Pasquali , Andy Aguilar , Taig Mac Carthy , Gerardo Fernández , Antonio Martorell , Enrique Onieva

Mixed-precision quantization (MPQ) suffers from the time-consuming process of searching the optimal bit-width allocation i.e., the policy) for each layer, especially when using large-scale datasets such as ISLVRC-2012. This limits the…

Computer Vision and Pattern Recognition · Computer Science 2023-08-24 Chen Tang , Kai Ouyang , Zenghao Chai , Yunpeng Bai , Yuan Meng , Zhi Wang , Wenwu Zhu

Direct-Coupling Analysis is a group of methods to harvest information about coevolving residues in a protein family by learning a generative model in an exponential family from data. In protein families of realistic size, this learning can…

Quantitative Methods · Quantitative Biology 2014-09-16 Magnus Ekeberg , Tuomo Hartonen , Erik Aurell

Protein language models (PLMs) are becoming practical tools for de novo protein design, yet their dual-use potential raises safety concerns. We show that domain adaptation to specific taxonomic groups can elicit toxic protein generation,…

Machine Learning · Computer Science 2026-03-05 Manuel Fernández Burda , Santiago Aranguri , Iván Arcuschin Moreno , Enzo Ferrante

Extracellular vesicles (EVs) have drawn rapidly increasing attention as the next-generation diagnostic biomarkers and therapeutic agents. However, the heterogeneous nature of EVs necessitates advanced methods for profiling EVs at the…

Biomolecules · Quantitative Biology 2025-07-08 Yiting Liu , Anthony James El-helou , Bill Soderstrom , Juanfang Ruan , Ying Zhu

Objective: Latent diffusion models (LDM) could alleviate data scarcity challenges affecting machine learning development for medical imaging. However, medical LDM strategies typically rely on short-prompt text encoders, nonmedical LDMs, or…

Image and Video Processing · Electrical Eng. & Systems 2026-01-09 Emerson P. Grabke , Babak Taati , Masoom A. Haider

Local differential privacy (LDP) has recently gained prominence as a powerful paradigm for collecting and analyzing sensitive data from users' devices. However, the inherent perturbation added by LDP protocols reduces the utility of the…

Cryptography and Security · Computer Science 2025-07-09 Alireza Khodaie , Berkay Kemal Balioglu , Mehmet Emre Gursoy

Due to the high memory and computational costs associated with large language models (LLMs), model compression techniques such as quantization, which reduces inference costs, and parameter-efficient fine-tuning (PEFT) methods like Low-Rank…

Machine Learning · Computer Science 2025-07-23 Hyesung Jeon , Yulhwa Kim , Jae-joon Kim

Identifying DNA- (DBPs) and RNA-binding proteins (RBPs) is crucial for the understanding of cell function, molecular interactions as well as regulatory functions. Owing to their high similarity, most of the existing approaches face…

Quantitative Methods · Quantitative Biology 2025-10-22 Nimisha Ghosh , Dheeran Sankaran , Rahul Balakrishnan Adhi , Sharath S , Amrut Anand

Deep neural networks have become the go-to method for biomedical instance segmentation. Generalist models like Cellpose demonstrate state-of-the-art performance across diverse cellular data, though their effectiveness often degrades on…

Computer Vision and Pattern Recognition · Computer Science 2025-08-18 Fabian H. Reith , Jannik Franzen , Dinesh R. Palli , J. Lorenz Rumberger , Dagmar Kainmueller

The analysis of secreted proteins represents a challenge for current proteomics techniques. Proteins are usually secreted at low concentrations in the culture media, which makes their recovery difficult. In addition, culture media are rich…

Laser-plasma based experiments are always more demanding about the plasma features which need to be generated during the interaction. This is valid for laser-plasma acceleration as well as for inertial confinement fusion experiments. Most…

Plasma Physics · Physics 2025-09-03 F. Filippi , M. Cipriani , S. Mastrostefano , M. Scisciò , F. Consoli

Lipolysis is a life-essential metabolic process, which supplies fatty acids stored in lipid droplets to the body in order to match the demands of building new cells and providing cellular energy. In this paper, we present a first…

Analysis of PDEs · Mathematics 2026-03-26 Reymart Salcedo-Lagunero , Klemens Fellner , Thomas Apel , Volker Kempf , Philipp Zilk

Proteins are arguably the most important class of biomarkers for health diagnostic purposes. Label-free solid-state nanopore sensing is a versatile technique for sensing and analysing biomolecules such as proteins at single-molecule level.…

Automatic segmentation of lesions in FDG-18 Whole Body (WB) PET/CT scans using deep learning models is instrumental for determining treatment response, optimizing dosimetry, and advancing theranostic applications in oncology. However, the…

Image and Video Processing · Electrical Eng. & Systems 2023-11-06 Gowtham Krishnan Murugesan , Diana McCrumb , Eric Brunner , Jithendra Kumar , Rahul Soni , Vasily Grigorash , Stephen Moore , Jeff Van Oss

Purpose: To design, implement, evaluate, and report on the regulatory requirements of a self-hosted LLM infrastructure for radiology adhering to the principle of least privilege, emphasizing technical feasibility, network isolation, and…

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