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Graphs as a type of data structure have recently attracted significant attention. Representation learning of geometric graphs has achieved great success in many fields including molecular, social, and financial networks. It is natural to…

Machine Learning · Computer Science 2021-07-08 Tian Xia , Wei-Shinn Ku

Plants are dynamic organisms and understanding temporal variations in vegetation is an essential problem for robots in the wild. However, associating repeated 3D scans of plants across time is challenging. A key step in this process is…

Computer Vision and Pattern Recognition · Computer Science 2023-06-08 Karoline Heiwolt , Cengiz Öztireli , Grzegorz Cielniak

We develop a neural parametric model for 3D leaves for plant modeling and reconstruction that are essential for agriculture and computer graphics. While neural parametric models are actively studied for humans and animals, plant leaves…

Computer Vision and Pattern Recognition · Computer Science 2025-08-08 Yang Yang , Dongni Mao , Hiroaki Santo , Yasuyuki Matsushita , Fumio Okura

We present a method for jointly recovering the appearance and internal structure of botanical plants from multi-view images based on 3D Gaussian Splatting (3DGS). While 3DGS exhibits robust reconstruction of scene appearance for novel-view…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Yang Yang , Risa Shinoda , Hiroaki Santo , Fumio Okura

Accurate point cloud segmentation for plant organs is crucial for 3D plant phenotyping. Existing solutions are designed problem-specific with a focus on certain plant species or specified sensor-modalities for data acquisition. Furthermore,…

Computer Vision and Pattern Recognition · Computer Science 2025-09-26 Andreas Gilson , Lukas Meyer , Oliver Scholz , Ute Schmid

We study inferring a tree-structured representation from a single image for object shading. Prior work typically uses the parametric or measured representation to model shading, which is neither interpretable nor easily editable. We propose…

Computer Vision and Pattern Recognition · Computer Science 2023-09-14 Chen Geng , Hong-Xing Yu , Sharon Zhang , Maneesh Agrawala , Jiajun Wu

We introduce ProcGen3D, a new approach for 3D content creation by generating procedural graph abstractions of 3D objects, which can then be decoded into rich, complex 3D assets. Inspired by the prevalent use of procedural generators in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-11 Xinyi Zhang , Daoyi Gao , Naiqi Li , Angela Dai

Anatomical trees play a central role in clinical diagnosis and treatment planning. However, accurately representing anatomical trees is challenging due to their varying and complex topology and geometry. Traditional methods for representing…

Computer Vision and Pattern Recognition · Computer Science 2024-06-21 Ashish Sinha , Ghassan Hamarneh

Tree structured graphical models are powerful at expressing long range or hierarchical dependency among many variables, and have been widely applied in different areas of computer science and statistics. However, existing methods for…

Machine Learning · Statistics 2014-01-17 Le Song , Han Liu , Ankur Parikh , Eric Xing

Pulmonary diseases rank prominently among the principal causes of death worldwide. Curing them will require, among other things, a better understanding of the complex 3D tree-shaped structures within the pulmonary system, such as airways,…

Computer Vision and Pattern Recognition · Computer Science 2024-10-21 Kangxian Xie , Jiancheng Yang , Donglai Wei , Ziqiao Weng , Pascal Fua

Choosing the right representation for geometry is crucial for making 3D models compatible with existing applications. Focusing on piecewise-smooth man-made shapes, we propose a new representation that is usable in conventional CAD modeling…

Graphics · Computer Science 2021-02-11 Dmitriy Smirnov , Mikhail Bessmeltsev , Justin Solomon

This paper introduces a method to extract a hierarchical tree representation from 3D unorganized polygonal data. The proposed approach first extracts a graph representation of the surface, which serves as the foundation for structural…

Graphics · Computer Science 2025-10-21 Diogo de Andrade , Nuno Fachada

Organ segmentation of plant point clouds is a prerequisite for the high-resolution and accurate extraction of organ-level phenotypic traits. Although the fast development of deep learning has boosted much research on segmentation of plant…

Computer Vision and Pattern Recognition · Computer Science 2025-10-28 Xin Yang , Ruiming Du , Hanyang Huang , Jiayang Xie , Pengyao Xie , Leisen Fang , Ziyue Guo , Nanjun Jiang , Yu Jiang , Haiyan Cen

Semantic labeling of 3D point clouds is important for the derivation of 3D models from real world scenarios in several economic fields such as building industry, facility management, town planning or heritage conservation. In contrast to…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Bernhard Japes , Jennifer Mack , Florian Rist , Katja Herzog , Reinhard Töpfer , Volker Steinhage

Tree-like structures, such as blood vessels, often express complexity at very fine scales, requiring high-resolution grids to adequately describe their shape. Such sparse morphology can alternately be represented by locations of centreline…

Computer Vision and Pattern Recognition · Computer Science 2018-11-09 Kerry Halupka , Rahil Garnavi , Stephen Moore

The orientation of cell division is a major determinant of three-dimensional plant morphogenesis. Whether and how a simple division orientation rule explains the establishment of symmetric body plans is a fundamental question. Testing such…

Cell Behavior · Quantitative Biology 2026-05-14 Naoya Kamamoto , Koichi Fujimoto

Inspired by recent findings that generative diffusion models learn semantically meaningful representations, we use them to discover the intrinsic hierarchical structure in biomedical 3D images using unsupervised segmentation. We show that…

Computer Vision and Pattern Recognition · Computer Science 2023-10-11 Nurislam Tursynbek , Marc Niethammer

Measuring semantic traits for phenotyping is an essential but labor-intensive activity in horticulture. Researchers often rely on manual measurements which may not be accurate for tasks such as measuring tree volume. To improve the accuracy…

Robotics · Computer Science 2020-02-03 Wenbo Dong , Pravakar Roy , Volkan Isler

We study end-to-end learning strategies for 3D shape inference from images, in particular from a single image. Several approaches in this direction have been investigated that explore different shape representations and suitable learning…

Computer Vision and Pattern Recognition · Computer Science 2019-08-21 Roman Klokov , Jakob Verbeek , Edmond Boyer

Machine vision for plant phenotyping is an emerging research area for producing high throughput in agriculture and crop science applications. Since 2D based approaches have their inherent limitations, 3D plant analysis is becoming state of…

Computer Vision and Pattern Recognition · Computer Science 2017-05-02 Ayan Chaudhury , Christopher Ward , Ali Talasaz , Alexander G. Ivanov , Mark Brophy , Bernard Grodzinski , Norman P. A. Huner , Rajni V. Patel , John L. Barron