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Erasure codes are an integral part of many distributed storage systems aimed at Big Data, since they provide high fault-tolerance for low overheads. However, traditional erasure codes are inefficient on reading stored data in degraded…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-06-27 Kyumars Sheykh Esmaili , Lluis Pamies-Juarez , Anwitaman Datta

Over the past years, the ever-growing trend on data storage demand, more specifically for "cold" data (i.e. rarely accessed), has motivated research for alternative systems of data storage. Because of its biochemical characteristics,…

Image and Video Processing · Electrical Eng. & Systems 2023-09-15 Xavier Pic , Melpomeni Dimopoulou , Eva Gil San Antonio , Marc Antonini

Partial MDS (PMDS) and sector-disk (SD) codes are classes of erasure correcting codes that combine locality with strong erasure correction capabilities. We construct PMDS and SD codes with local regeneration where each local code is a…

Information Theory · Computer Science 2021-06-14 Lukas Holzbaur , Sven Puchinger , Eitan Yaakobi , Antonia Wachter-Zeh

An insdel refers to a deletion or an insertion, and an edit refers to an insdel or a substitution. In this paper, we consider the segmented single-insdel (resp. single-edit) channel, where the channel's input bit stream is partitioned into…

Information Theory · Computer Science 2024-05-08 Zhen Li , Xuan He , Xiaohu Tang

Staircase codes (SCCs) are typically decoded using iterative bounded-distance decoding (BDD) and hard decisions. In this paper, a novel decoding algorithm is proposed, which partially uses soft information from the channel. The proposed…

Signal Processing · Electrical Eng. & Systems 2020-06-05 Yi Lei , Alex Alvarado , Bin Chen , Xiong Deng , Zizheng Cao , Jianqiang Li , Kun Xu

With the emergence of new storage and communication methods, the insertion, deletion, and substitution (IDS) channel has attracted considerable attention. However, many topics on the IDS channel and the associated Levenshtein distance…

Information Theory · Computer Science 2025-12-15 Alan J. X. Guo , Sihan Sun , Xiang Wei , Mengyi Wei , Xin Chen

We present the construction of a family of erasure correcting codes for distributed storage that achieve low repair bandwidth and complexity at the expense of a lower fault tolerance. The construction is based on two classes of codes, where…

Information Theory · Computer Science 2018-09-03 Siddhartha Kumar , Alexandre Graell i Amat , Iryna Andriyanova , Fredrik Brännström , Eirik Rosnes

An explicit construction of systematic MDS codes, called HashTag+ codes, with arbitrary sub-packetization level for all-node repair is proposed. It is shown that even for small sub-packetization levels, HashTag+ codes achieve the optimal…

Information Theory · Computer Science 2020-02-14 Katina Kralevska , Danilo Gligoroski

We consider the problem of synchronizing data in distributed storage networks under an edit model that includes deletions and insertions. We present two modifications of MDS, regenerating and locally repairable codes that allow updates in…

Information Theory · Computer Science 2014-09-05 Salim El Rouayheb , Sreechakra Goparaju , Han Mao Kiah , Olgica Milenkovic

The two-dimensional magnetic recording (TDMR) technology promises storage densities of $10$ terabits per square inch. However, when tracks are squeezed together, a bit stored in the two-dimensional (TD) grid suffers inter-symbol…

Information Theory · Computer Science 2021-02-03 Beyza Dabak , Ahmed Hareedy , Robert Calderbank

Over the past years, the ever-growing trend on data storage demand, more specifically for "cold" data (i.e. rarely accessed), has motivated research for alternative systems of data storage. Because of its biochemical characteristics,…

Image and Video Processing · Electrical Eng. & Systems 2023-05-11 Xavier Pic , Eva Gil San Antonio , Melpomeni Dimopoulou , Marc Antonini

Code datasets are of immense value for training neural-network-based code completion models, where companies or organizations have made substantial investments to establish and process these datasets. Unluckily, these datasets, either built…

Software Engineering · Computer Science 2023-08-29 Zhensu Sun , Xiaoning Du , Fu Song , Li Li

In order to correct the pair-errors generated during the transmission of modern high-density data storage that the outputs of the channels consist of overlapping pairs of symbols, a new coding scheme named symbol-pair code is proposed. The…

Information Theory · Computer Science 2025-09-17 Xiujing Zheng , Liqi Wang , Shixin Zhu

Although the expenses associated with DNA sequencing have been rapidly decreasing, the current cost of sequencing information stands at roughly $120/GB, which is dramatically more expensive than reading from existing archival storage…

Discrete Mathematics · Computer Science 2023-11-30 Daniella Bar-Lev , Omer Sabary , Ryan Gabrys , Eitan Yaakobi

Maximum distance separable (MDS) array codes constitute an important class of error-correcting codes due to their optimal distance properties and their relevance in distributed storage systems. In this paper, we investigate the construction…

To equip DNA-based data storage with random-access capabilities, Yazdi et al. (2018) prepended DNA strands with specially chosen address sequences called primers and provided certain design criteria for these primers. We provide explicit…

Information Theory · Computer Science 2019-01-07 Yeow Meng Chee , Han Mao Kiah , Hengjia Wei

Encoding information in combinations of pre-synthesised deoxyribonucleic acid (DNA) strands (referred to as motifs) is an interesting approach to DNA storage that could potentially circumvent the prohibitive costs of…

Information Theory · Computer Science 2024-12-05 Roman Sokolovskii , Parv Agarwal , Luis Alberto Croquevielle , Zijian Zhou , Thomas Heinis

This paper considers coding for so-called partially stuck memory cells. Such memory cells can only store partial information as some of their levels cannot be used due to, e.g., wear out. First, we present a new code construction for…

Information Theory · Computer Science 2021-03-18 Haider Al Kim , Sven Puchinger , Antonia Wachter-Zeh

In order to achieve fault tolerance, highly reliable system often require the ability to detect errors as soon as they occur and prevent the speared of erroneous information throughout the system. Thus, the need for codes capable of…

Information Theory · Computer Science 2010-02-08 Muzhir Al-Ani , Qeethara Al-Shayea

We study the problem of coded information retrieval for block-structured data, motivated by DNA-based storage systems where a database is partitioned into multiple files that must each be recoverable as an atomic unit. We initiate and…

Information Theory · Computer Science 2026-03-19 Daniella Bar-Lev