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State space models (SSMs) leverage linear, time-invariant (LTI) systems to effectively learn sequences with long-range dependencies. By analyzing the transfer functions of LTI systems, we find that SSMs exhibit an implicit bias toward…

Machine Learning · Computer Science 2024-10-04 Annan Yu , Dongwei Lyu , Soon Hoe Lim , Michael W. Mahoney , N. Benjamin Erichson

This paper introduces novel deep dynamical models designed to represent continuous-time sequences. Our approach employs a neural emission model to generate each data point in the time series through a non-linear transformation of a latent…

Machine Learning · Computer Science 2025-02-06 Sheng Cheng , Deqian Kong , Jianwen Xie , Kookjin Lee , Ying Nian Wu , Yezhou Yang

Recently, recurrent models based on linear state space models (SSMs) have shown promising performance in language modeling (LM), competititve with transformers. However, there is little understanding of the in-principle abilities of such…

Computation and Language · Computer Science 2025-12-15 Yash Sarrof , Yana Veitsman , Michael Hahn

Reservoir computing (RC), is a class of computational methods such as Echo State Networks (ESN) and Liquid State Machines (LSM) describe a generic method to perform pattern recognition and temporal analysis with any non-linear system. This…

Machine Learning · Computer Science 2024-11-19 Anmol Biswas , Sharvari Ashok Medhe , Raghav Singhal , Udayan Ganguly

A grand challenge in modern neuroscience is to bridge the gap between the detailed mapping of microscale neural circuits and mechanistic understanding of cognitive functions. While extensive knowledge exists about neuronal connectivity and…

Neurons and Cognition · Quantitative Biology 2026-02-11 Sen Lu , Xiaoyu Zhang , Mingtao Hu , Eric Yeu-Jer Lee , Soohyeon Kim , Wei D. Lu

Small integration time steps limit molecular dynamics (MD) simulations to millisecond time scales. Markov state models (MSMs) and equation-free approaches learn low-dimensional kinetic models from MD simulation data by performing…

Computational Physics · Physics 2020-07-03 Hythem Sidky , Wei Chen , Andrew L. Ferguson

Foundation models, now powering most of the exciting applications in deep learning, are almost universally based on the Transformer architecture and its core attention module. Many subquadratic-time architectures such as linear attention,…

Machine Learning · Computer Science 2024-06-03 Albert Gu , Tri Dao

Modeling long-range dependencies in sequential data is a crucial step in sequence learning. A recently developed model, the Structured State Space (S4), demonstrated significant effectiveness in modeling long-range sequences. However, It is…

Machine Learning · Computer Science 2024-03-27 Jiqun Chu , Zuoquan Lin

Recent advances in event-based neuromorphic systems have resulted in significant interest in the use and development of spiking neural networks (SNNs). However, the non-differentiable nature of spiking neurons makes SNNs incompatible with…

Neural and Evolutionary Computing · Computer Science 2020-07-10 Ali Lotfi Rezaabad , Sriram Vishwanath

Sequence modeling is a crucial area across various domains, including Natural Language Processing (NLP), speech recognition, time series forecasting, music generation, and bioinformatics. Recurrent Neural Networks (RNNs) and Long Short Term…

Machine Learning · Computer Science 2024-04-26 Badri Narayana Patro , Vijay Srinivas Agneeswaran

Modern sequence modeling is dominated by two families: Transformers, whose self-attention can access arbitrary elements of the visible sequence, and structured state-space models, which propagate information through an explicit recurrent…

Machine Learning · Computer Science 2026-04-22 Liubomyr Horbatko

State-space models have gained popularity in sequence modelling due to their simple and efficient network structures. However, the absence of nonlinear activation along the temporal direction limits the model's capacity. In this paper, we…

Machine Learning · Computer Science 2023-11-02 Shida Wang , Beichen Xue

Linear recurrent networks (LRNNs) and linear state space models (SSMs) promise computational and memory efficiency on long-sequence modeling tasks, yet their diagonal state transitions limit expressivity. Dense and nonlinear architectures…

Machine Learning · Computer Science 2026-03-03 Igor Dubinin , Antonio Orvieto , Felix Effenberger

Transformer models have achieved superior performance in various natural language processing tasks. However, the quadratic computational cost of the attention mechanism limits its practicality for long sequences. There are existing…

Computation and Language · Computer Science 2022-12-19 Simiao Zuo , Xiaodong Liu , Jian Jiao , Denis Charles , Eren Manavoglu , Tuo Zhao , Jianfeng Gao

Processing long temporal sequences is a key challenge in deep learning. In recent years, Transformers have become state-of-the-art for this task, but suffer from excessive memory requirements due to the need to explicitly store the…

Machine Learning · Computer Science 2025-07-09 Sebastian Siegel , Ming-Jay Yang , John-Paul Strachan

Models using structured state space sequence (S4) layers have achieved state-of-the-art performance on long-range sequence modeling tasks. An S4 layer combines linear state space models (SSMs), the HiPPO framework, and deep learning to…

Machine Learning · Computer Science 2023-03-06 Jimmy T. H. Smith , Andrew Warrington , Scott W. Linderman

In this paper, we investigate the length-extension of state-space models (SSMs) in language modeling. Length extension involves training models on short sequences and testing them on longer ones. We show that state-space models trained with…

Computation and Language · Computer Science 2024-06-05 Shida Wang

Softmax attention is the principle backbone of foundation models for various artificial intelligence applications, yet its quadratic complexity in sequence length can limit its inference throughput in long-context settings. To address this…

Machine Learning · Computer Science 2024-12-10 Jerome Sieber , Carmen Amo Alonso , Alexandre Didier , Melanie N. Zeilinger , Antonio Orvieto

Recurrent neural networks (RNNs) notoriously struggle to learn long-term memories, primarily due to vanishing and exploding gradients. The recent success of state-space models (SSMs), a subclass of RNNs, to overcome such difficulties…

Machine Learning · Computer Science 2024-11-06 Nicolas Zucchet , Antonio Orvieto

Although transformers dominate many code-specific tasks, they have significant limitations. This paper explores State Space Models (SSMs) as a promising alternative for code understanding tasks such as retrieval, classification, and clone…

Software Engineering · Computer Science 2025-09-23 Shweta Verma , Abhinav Anand , Mira Mezini