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Related papers: MOSAIK: Multi-Origin Spatial Transcriptomics Analy…

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This paper proposes a spatiotemporal (ST) fusion framework robust against diverse noise for satellite images, named Temporally-Similar Structure-Aware ST fusion (TSSTF). ST fusion is a promising approach to address the trade-off between the…

Signal Processing · Electrical Eng. & Systems 2026-01-30 Ryosuke Isono , Shunsuke Ono

Cross-domain mapping has been a very active topic in recent years. Given one image, its main purpose is to translate it to the desired target domain, or multiple domains in the case of multiple labels. This problem is highly challenging due…

Computer Vision and Pattern Recognition · Computer Science 2019-09-06 Andrés Romero , Pablo Arbeláez , Luc Van Gool , Radu Timofte

In histopathology, tissue samples are often larger than a standard microscope slide, making stitching of multiple fragments necessary to process entire structures such as tumors. Automated stitching is a prerequisite for scaling analysis,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-06 Stefan Brandstätter , Maximilian Köller , Philipp Seeböck , Alissa Blessing , Felicitas Oberndorfer , Svitlana Pochepnia , Helmut Prosch , Georg Langs

Spatial Transcriptomics (ST) provides spatially resolved gene expression profiles within intact tissue architecture, enabling molecular analysis in histological context. However, the high cost, limited throughput, and restricted data…

Machine Learning · Computer Science 2026-03-31 Yaoyu Fang , Jiahe Qian , Xinkun Wang , Lee A. Cooper , Bo Zhou

The advent of next-generation sequencing-based spatially resolved transcriptomics (SRT) techniques has reshaped genomic studies by enabling high-throughput gene expression profiling while preserving spatial and morphological context.…

Applications · Statistics 2025-02-20 Bencong Zhu , Alberto Cassese , Marina Vannucci , Michele Guindani , Qiwei Li

Recent advances in spatial omics technologies have revolutionized our ability to study biological systems with unprecedented resolution. By preserving the spatial context of molecular measurements, these methods enable comprehensive mapping…

Quantitative Methods · Quantitative Biology 2025-09-18 Zhiwei Fan , Tiangang Wang , Kexin Huang , Binwu Ying , Xiaobo Zhou

This paper describes the Bayesian Technique for Multi-image Analysis (BaTMAn), a novel image-segmentation technique based on Bayesian statistics that characterizes any astronomical dataset containing spatial information and performs a…

Instrumentation and Methods for Astrophysics · Physics 2017-01-18 J. Casado , Y. Ascasibar , R. García-Benito , G. Guidi , O. S. Choudhury , E. Bellocchi , S. F. Sánchez , A. I. Díaz

Simultaneous Localization and Mapping (SLAM) is a critical task in robotics, enabling systems to autonomously navigate and understand complex environments. Current SLAM approaches predominantly rely on geometric cues for mapping and…

Robotics · Computer Science 2025-03-28 Yongxu Wang , Xu Cao , Weiyun Yi , Zhaoxin Fan

Interactive segmentation has gained significant attention for its application in human-computer interaction and data annotation. To address the target scale variation issue in interactive segmentation, a novel multi-scale token adaptation…

Computer Vision and Pattern Recognition · Computer Science 2024-02-06 Long Xu , Shanghong Li , Yongquan Chen , Jun Luo , Shiwu Lai

Recent advances in computational pathology have leveraged vision-language models to learn joint representations of Hematoxylin and Eosin (HE) images with spatial transcriptomic (ST) profiles. However, existing approaches typically align HE…

Spatially resolved transcriptomics brings exciting breakthroughs to single-cell analysis by providing physical locations along with gene expression. However, as a cost of the extremely high spatial resolution, the cellular level spatial…

Genomics · Quantitative Biology 2024-02-19 Hongzhi Wen , Wenzhuo Tang , Wei Jin , Jiayuan Ding , Renming Liu , Xinnan Dai , Feng Shi , Lulu Shang , Hui Liu , Yuying Xie

The spatial location of cells within tissues and organs is crucial for the manifestation of their specific functions.Spatial transcriptomics technology enables comprehensive measurement of the gene expression patterns in tissues while…

Quantitative Methods · Quantitative Biology 2024-07-12 Shuailin Xue , Fangfang Zhu , Changmiao Wang , Wenwen Min

Although speech recognition algorithms have developed quickly in recent years, achieving high transcription accuracy across diverse audio formats and acoustic environments remains a major challenge. This work explores how incorporating…

Sound · Computer Science 2025-03-31 Aniket Abhishek Soni

Deep learning underpins a wide range of applications in MRI, including reconstruction, artifact removal, and segmentation. However, progress has been driven largely by public datasets focused on brain and knee imaging, shaping how models…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Paula Arguello , Berk Tinaz , Mohammad Shahab Sepehri , Maryam Soltanolkotabi , Mahdi Soltanolkotabi

Learning generalizable trajectory representations from raw GPS traces remains difficult because the data is continuous, noisy, and irregularly sampled. Spatial tokenization is also challenging: fine grids yield sparse cells with weak…

Machine Learning · Computer Science 2026-05-20 Zhen Xiong , Shang-Ling Hsu , Cyrus Shahabi

Molecular orbital (MO) is one of the most fundamental concepts for molecules, relating to all branches of chemistry, while scanning tunneling microscopy (STM) has been widely recognized for its potential to measure the spatial distribution…

Chemical Physics · Physics 2025-08-01 Yu Zhu , Renjie Xue , Hao Ren , Yicheng Chen , Wenjie Yan , Bingzheng Wu , Sai Duan , Haiming Zhang , Lifeng Chi , Xin Xu

Multi-contrast Magnetic Resonance Imaging super-resolution (MC-MRI SR) aims to enhance low-resolution (LR) contrasts leveraging high-resolution (HR) references, shortening acquisition time and improving imaging efficiency while preserving…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Xiaoman Wu , Lubin Gan , Siying Wu , Jing Zhang , Yunwei Ou , Xiaoyan Sun

Data-driven soft sensors have been widely applied in complex industrial processes. However, the interpretable spatio-temporal features extraction by soft sensors remains a challenge. In this light, this work introduces a novel method termed…

Systems and Control · Electrical Eng. & Systems 2025-11-04 Qianchao Wang , Peng Sha , Leena Heistrene , Yuxuan Ding , Yaping Du

Spatial studies of transcriptome provide biologists with gene expression maps of heterogeneous and complex tissues. However, most experimental protocols for spatial transcriptomics suffer from the need to select beforehand a small fraction…

Machine Learning · Computer Science 2019-05-08 Romain Lopez , Achille Nazaret , Maxime Langevin , Jules Samaran , Jeffrey Regier , Michael I. Jordan , Nir Yosef