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With the increasing availability of high-dimensional data, analysts often rely on exploratory data analysis to understand complex data sets. A key approach to exploring such data is dimensionality reduction, which embeds high-dimensional…

Machine Learning · Computer Science 2024-12-17 Pavlin G. Poličar , Blaž Zupan

Over the last two decades, topological data analysis (TDA) has emerged as a very powerful data analytic approach which can deal with various data modalities of varying complexities. One of the most commonly used tools in TDA is persistent…

Methodology · Statistics 2025-12-08 Anass El Yaagoubi Bourakna , Moo K. Chung , Hernando Ombao

Motivation: The Mapper algorithm is an essential tool to explore shape of data in topology data analysis. With a dataset as an input, the Mapper algorithm outputs a graph representing the topological features of the whole dataset. This…

Algebraic Topology · Mathematics 2025-01-31 Yuyang Tao , Shufei Ge

Time-series classification (TSC) has advanced significantly with deep learning, yet most models rely solely on raw numerical inputs, overlooking alternative representations. While texture-based encodings such as Gramian Angular Fields (GAF)…

Computer Vision and Pattern Recognition · Computer Science 2026-05-01 Madhumitha Venkatesan , Xuyang Chen , Dongyu Liu

DADApy is a python software package for analysing and characterising high-dimensional data manifolds. It provides methods for estimating the intrinsic dimension and the probability density, for performing density-based clustering and for…

Firm financials are well established as return predictors, being the inspiration for a large set of anomalies in the asset pricing literature. Employing topological data analysis we revisit the question of association between seven of the…

Statistical Finance · Quantitative Finance 2019-11-26 Pawel Dlotko , Wanling Qiu , Simon Rudkin

Unfamiliar or esoteric visual forms arise in many areas of visualization. While such forms can be intriguing, it can be unclear how to make effective use of them without long periods of practice or costly user studies. In this work we…

Human-Computer Interaction · Computer Science 2021-04-12 Andrew McNutt

Topological data analysis (TDA) is an area of data science that focuses on using invariants from algebraic topology to provide multiscale shape descriptors for geometric data sets such as point clouds. One of the most important such…

Computational Geometry · Computer Science 2023-06-21 David Loiseaux , Mathieu Carrière , Andrew J. Blumberg

Big Data involves both a large number of events but also many variables. This paper will concentrate on the challenge presented by the large number of variables in a Big Dataset. It will start with a brief review of exploratory data…

Applications · Statistics 2019-07-24 S. J. Watts , L. Crow

Many data sets, crucial for today's applications, consist essentially of enormous networks, containing millions or even billions of elements. Having the possibility of visualizing such networks is of paramount importance. We propose an…

Data Structures and Algorithms · Computer Science 2023-07-25 Giuseppe Di Battista , Fabrizio Grosso , Silvia Montorselli , Maurizio Patrignani

The efficiency of modern computer graphics allows us to explore collections of space curves simultaneously with "drag-to-rotate" interfaces. This inspires us to replace "scatterplots of points" with "scatterplots of curves" to…

Human-Computer Interaction · Computer Science 2022-03-11 Nate Strawn

Under the banner of `Big Data', the detection and classification of structure in extremely large, high dimensional, data sets, is, one of the central statistical challenges of our times. Among the most intriguing approaches to this…

Methodology · Statistics 2022-06-08 Robert J. Adler , Sarit Agami , Pratyush Pranav

Data Visualization has become an important aspect of big data analytics and has grown in sophistication and variety. We specifically identify the need for an analytical framework for data visualization with textual information. Data…

Social and Information Networks · Computer Science 2020-05-19 Cherilyn Conner , Jim Samuel , Andrey Kretinin , Yana Samuel , Lee Nadeau

Exploring the shape of point configurations has been a key driver in the evolution of TDA (short for topological data analysis) since its infancy. This survey illustrates the recent efforts to broaden these ideas to model spatial…

Computational Geometry · Computer Science 2024-06-07 Sebastiano Cultrera di Montesano , Ondrej Draganov , Herbert Edelsbrunner , Morteza Saghafian

Loss landscapes are a powerful tool for understanding neural network optimization and generalization, yet traditional low-dimensional analyses often miss complex topological features. We present Landscaper, an open-source Python package for…

Motivation: The visualization and analysis of high-dimensional data are essential in biomedical research. There is a need for secure, scalable, and reproducible tools to facilitate data exploration and interpretation. Results: We introduce…

Quantitative Methods · Quantitative Biology 2025-04-15 Xijin Ge

Denoising diffusion probabilistic models are currently becoming the leading paradigm of generative modeling for many important data modalities. Being the most prevalent in the computer vision community, diffusion models have also recently…

Machine Learning · Computer Science 2024-10-08 Akim Kotelnikov , Dmitry Baranchuk , Ivan Rubachev , Artem Babenko

Additive models can be used for interpretable machine learning for their clarity and simplicity. However, In the classical models for high-order data, the vectorization operation disrupts the data structure, which may lead to degenerated…

Machine Learning · Computer Science 2024-06-06 Yang Chen , Ce Zhu , Jiani Liu , Yipeng Liu

This paper investigates new data exploration experiences that enable blind users to interact with statistical data visualizations$-$bar plots, heat maps, box plots, and scatter plots$-$leveraging multimodal data representations. In addition…

Human-Computer Interaction · Computer Science 2024-03-04 JooYoung Seo , Yilin Xia , Bongshin Lee , Sean McCurry , Yu Jun Yam

Improvements in experimental and computational technologies have led to significant increases in data available for analysis. Topological data analysis (TDA) is an emerging area of mathematical research that can identify structures in these…

Quantitative Methods · Quantitative Biology 2022-07-25 Maria-Veronica Ciocanel , Riley Juenemann , Adriana T. Dawes , Scott A. McKinley