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We introduce a parallel algorithm to construct a preconditioner for solving a large, sparse linear system where the coefficient matrix is a Laplacian matrix (a.k.a., graph Laplacian). Such a linear system arises from applications such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-30 Tianyu Liang , Chao Chen , Yotam Yaniv , Hengrui Luo , David Tench , Xiaoye S. Li , Aydin Buluc , James Demmel

Graph Convolutional Networks (GCNs) are recently getting much attention in bioinformatics and chemoinformatics as a state-of-the-art machine learning approach with high accuracy. GCNs process convolutional operations along with graph…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-28 Yusuke Nagasaka , Akira Nukada , Ryosuke Kojima , Satoshi Matsuoka

The solution of linear systems of equations is a central task in a number of scientific and engineering applications. In many cases the solution of linear systems may take most of the simulation time thus representing a major bottleneck in…

Numerical Analysis · Mathematics 2020-10-28 Giovanni Isotton , Carlo Janna , Massimo Bernaschi

The reduction of a banded matrix to bidiagonal form is a critical step in the calculation of Singular Values, a cornerstone of scientific computing and AI. Although inherently parallel, this step has traditionally been considered unsuitable…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-14 Evelyne Ringoot , Rabab Alomairy , Alan Edelman

Network pruning can reduce the computation cost of deep neural network (DNN) models. However, sparse models often produce randomly-distributed weights to maintain accuracy, leading to irregular computations. Consequently, unstructured…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-19 Cong Guo , Fengchen Xue , Jingwen Leng , Yuxian Qiu , Yue Guan , Weihao Cui , Quan Chen , Minyi Guo

Machine learning is increasingly used to improve decisions within branch-and-bound algorithms for mixed-integer programming. Many existing approaches rely on deep learning, which often requires very large training datasets and substantial…

Machine Learning · Computer Science 2026-04-02 Selin Bayramoğlu , George L Nemhauser , Nikolaos V Sahinidis

Matrix Factorization (MF) on large scale data takes substantial time on a Central Processing Unit (CPU). While Graphical Processing Unit (GPU)s could expedite the computation of MF, the available memory on a GPU is finite. Leveraging GPUs…

Machine Learning · Computer Science 2023-04-28 Prasad Bhavana , Vineet Padmanabhan

In recent years, a new kind of accelerated hardware has gained popularity in the Artificial Intelligence (AI) and Machine Learning (ML) communities which enables extremely high-performance tensor contractions in reduced precision for deep…

Computational Physics · Physics 2024-05-01 Adela Habib , Joshua Finkelstein , Anders M. N. Niklasson

Performing Bayesian inference on large spatio-temporal models requires extracting inverse elements of large sparse precision matrices for marginal variances, as well as estimating model hyperparameters. Although direct matrix factorizations…

Computation · Statistics 2026-03-17 Abylay Zhumekenov , Elias T. Krainski , Håvard Rue

Solving inverse problems and achieving statistical rigour in landscape evolution models requires running many model realizations. Parallel computation is necessary to achieve this in a reasonable time. However, no previous algorithm is…

Computational Engineering, Finance, and Science · Computer Science 2019-01-23 Richard Barnes

To find deterministic solutions to the transient $S_N$ neutron transport equation, iterative schemes are typically used to treat the scattering (and fission) source terms. We explore the one-cell inversion iteration scheme to do this on the…

Computational Physics · Physics 2023-08-10 J. P. Morgan , Ilham Variansyah , Todd S. Palmer , Kyle E. Niemeyer

Sparse tiling is a technique to fuse loops that access common data, thus increasing data locality. Unlike traditional loop fusion or blocking, the loops may have different iteration spaces and access shared datasets through indirect memory…

Computational Engineering, Finance, and Science · Computer Science 2019-06-20 Fabio Luporini , Michael Lange , Christian T. Jacobs , Gerard J. Gorman , J. Ramanujam , Paul H. J. Kelly

In this paper, we use graphics processing units(GPU) to accelerate sparse and arbitrary structured neural networks. Sparse networks have nodes in the network that are not fully connected with nodes in preceding and following layers, and…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-05-12 Aavaas Gajurel , Sushil J. Louis , Frederick C Harris

Real-time trajectory optimization for nonlinear constrained autonomous systems is critical and typically performed by CPU-based sequential solvers. Specifically, reliance on global sparse linear algebra or the serial nature of dynamic…

Robotics · Computer Science 2026-03-13 Yilin Zou , Zhong Zhang , Maxime Robic , Fanghua Jiang

LU factorization for sparse matrices is the most important computing step for many engineering and scientific computing problems such as circuit simulation. But parallelizing LU factorization with the Graphic Processing Units (GPU) still…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-14 Shaoyi Peng , Sheldon X. -D. Tan

We demonstrate an FPGA implementation of a parallel and reconfigurable architecture for sparse neural networks, capable of on-chip training and inference. The network connectivity uses pre-determined, structured sparsity to significantly…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-29 Sourya Dey , Diandian Chen , Zongyang Li , Souvik Kundu , Kuan-Wen Huang , Keith M. Chugg , Peter A. Beerel

Modern AI relies on huge matrix multiplications (MatMuls), whose computation poses a scalability problem for inference and training. We propose an alternative, GPU native bilinear operator to MatMuls in neural networks, which offers a…

Machine Learning · Computer Science 2025-10-22 Nir Ailon , Akhiad Bercovich , Yahel Uffenheimer , Omri Weinstein

As the need for computational power and efficiency rises, parallel systems become increasingly popular among various scientific fields. While multiple core-based architectures have been the center of attention for many years, the rapid…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-06-11 E. I. Ioannidis , N. Cheimarios , A. N. Spyropoulos , A. G. Boudouvis

Block matrix structure is commonly arising is various physics and engineering applications. There are various advantages in preserving the blocks structure while computing the inversion of such partitioned matrices. In this context, using…

Numerical Analysis · Mathematics 2023-11-22 R. Thiru Senthil

We implement two novel algorithms for sparse-matrix dense-matrix multiplication (SpMM) on the GPU. Our algorithms expect the sparse input in the popular compressed-sparse-row (CSR) format and thus do not require expensive format conversion.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-13 Carl Yang , Aydin Buluc , John D. Owens