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Deep subspace clustering (DSC) networks based on self-expressive model learn representation matrix, often implemented in terms of fully connected network, in the embedded space. After the learning is finished, representation matrix is used…

Computer Vision and Pattern Recognition · Computer Science 2024-01-31 Lovro Sindičić , Ivica Kopriva

Complex networks are a powerful modeling tool, allowing the study of countless real-world systems. They have been used in very different domains such as computer science, biology, sociology, management, etc. Authors have been trying to…

Social and Information Networks · Computer Science 2014-02-04 Burcu Kantarcı , Vincent Labatut

Heterogeneous and complex networks represent intertwined interactions between real-world elements or agents. Determining the multi-scale mesoscopic organization of clusters and intertwined structures is still a fundamental and open problem…

Physics and Society · Physics 2025-01-20 Pablo Villegas , Andrea Gabrielli , Anna Poggialini , Tommaso Gili

Our goal in this paper is to apply the topological signal processing (TSP) framework to the analysis of 3D Point Clouds (PCs) represented on simplicial complexes. Building on Discrete Exterior Calculus (DEC) theory for vector fields, we…

Signal Processing · Electrical Eng. & Systems 2026-02-24 Tiziana Cattai , Stefania Sardellitti , Stefania Colonnese , Sergio Barbarossa

Cognitive map learners (CML) are a collection of separate yet collaboratively trained single-layer artificial neural networks (matrices), which navigate an abstract graph by learning internal representations of the node states, edge…

Neural and Evolutionary Computing · Computer Science 2024-05-01 Nathan McDonald , Anthony Dematteo

The goal of this paper is to establish the fundamental tools to analyze signals defined over a topological space, i.e. a set of points along with a set of neighborhood relations. This setup does not require the definition of a metric and…

Signal Processing · Electrical Eng. & Systems 2020-10-28 Sergio Barbarossa , Stefania Sardellitti

We develop a novel framework for modeling diffusion on complex networks by constructing Laplacian-like operators based on walks around a graph. Our approach introduces a parametric family of walk-based Laplacians that naturally incorporate…

Social and Information Networks · Computer Science 2026-01-19 Francesca Arrigo , Fabio Durastante

Traditionally, interaction systems have been described as networks, where links encode information on the pairwise influences among the nodes. Yet, in many systems, interactions take place in larger groups. Recent work has shown that…

Adaptation and Self-Organizing Systems · Physics 2020-09-30 Maxime Lucas , Giulia Cencetti , Federico Battiston

We propose a framework for constructing combinatorial complexes (CCs) from fMRI time series data that captures both pairwise and higher-order neural interactions through information-theoretic measures, bridging topological deep learning and…

Neurons and Cognition · Quantitative Biology 2026-01-06 Valentina Sánchez , Çiçek Güven , Koen Haak , Theodore Papamarkou , Gonzalo Nápoles , Marie Šafář Postma

Cell complexes are topological spaces constructed from simple blocks called cells. They generalize graphs, simplicial complexes, and polyhedral complexes that form important domains for practical applications. They also provide a…

Machine Learning · Computer Science 2021-03-03 Mustafa Hajij , Kyle Istvan , Ghada Zamzmi

In digital pathology, the spatial context of cells is important for cell classification, cancer diagnosis and prognosis. To model such complex cell context, however, is challenging. Cells form different mixtures, lineages, clusters and…

Image and Video Processing · Electrical Eng. & Systems 2023-04-06 Shahira Abousamra , Rajarsi Gupta , Tahsin Kurc , Dimitris Samaras , Joel Saltz , Chao Chen

Graph Signal Processing deals with the problem of analyzing and processing signals defined on graphs. In this paper, we introduce a novel filtering method for graph-based signals by employing ideas from topological data analysis. We begin…

Signal Processing · Electrical Eng. & Systems 2024-08-27 Matias de Jong van Lier , Sebastián Elías Graiff Zurita , Shizuo Kaji

Many modern datasets are large and carry complex structural relationships. Graph-based methods have traditionally been used to represent networked data, modeling individual elements as nodes and pairwise interactions as edges. Furthermore,…

Signal Processing · Electrical Eng. & Systems 2026-05-25 Flavia Petruso , Maria Giulia Preti , Dimitri Van De Ville

Complex networks usually exhibit a rich architecture organized over multiple intertwined scales. Information pathways are expected to pervade these scales reflecting structural insights that are not manifest from analyses of the network…

Physics and Society · Physics 2022-09-16 Pablo Villegas , Andrea Gabrielli , Francesca Santucci , Guido Caldarelli , Tommaso Gili

This paper introduces topological Slepians, i.e., a novel class of signals defined over topological spaces (e.g., simplicial complexes) that are maximally concentrated on the topological domain (e.g., over a set of nodes, edges, triangles,…

Signal Processing · Electrical Eng. & Systems 2022-10-27 Claudio Battiloro , Paolo Di Lorenzo , Sergio Barbarossa

Graphs serve as powerful tools for modeling pairwise interactions in diverse fields such as biology, material science, and social networks. However, they inherently overlook interactions involving more than two entities. Simplicial…

Algebraic Topology · Mathematics 2024-12-05 Xiang Liu , Ran Liu , Jingyan Li , Rongling Wu , Jie Wu

Complex systems are characterized by many interacting units that give rise to emergent behavior. A particularly advantageous way to study these systems is through the analysis of the networks that encode the interactions among the system's…

Physics and Society · Physics 2019-03-21 Alberto Aleta , Yamir Moreno

Complex systems are difficult to study not only because they are nonlinear, multiscale, and often nonstationary, but because their scientifically relevant organization is often invisible at the level of individual components, pairwise…

Physics and Society · Physics 2026-03-30 Mark M. Bailey

We study the time scales associated to diffusion processes that take place on multiplex networks, i.e. on a set of networks linked through interconnected layers. To this end, we propose the construction of a supra-Laplacian matrix, which…

In multicellular organisms, cells coordinate their activities through cell-cell communication (CCC), which is crucial for development, tissue homeostasis, and disease progression. Recent advances in single-cell and spatial omics…

Quantitative Methods · Quantitative Biology 2026-03-24 Xiangzheng Cheng , Haili Huang , Ye Su , Qing Nie , Xiufen Zou , Suoqin Jin