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The clinical application of patient-specific modelling of the heart can provide valuable insights in supplementing and advancing methods of diagnosis as well as helping to devise the best possible therapeutic approach for each individual…

Medical Physics · Physics 2023-08-03 Sebastian Skatulla , Carlo Sansour , Mary Familusi , Jagir Hussan , Ntobeko Ntusi

Microcirculation of blood and oxygen transport play important roles in biological function of optic nerve and are directly affected by damages or pathologies. This work develops a multi-domain model for optic nerve, that includes important…

Biological Physics · Physics 2024-01-18 Zilong Song , Shixin Xu , Robert Eisenberg , Huaxiong Huang

We present a new method for the geometric reconstruction of elastic surfaces simulated by the immersed boundary method with the goal of simulating the motion and interactions of cells in whole blood. Our method uses parameter-free radial…

Numerical Analysis · Mathematics 2022-08-31 Andrew Kassen , Aaron Barrett , Varun Shankar , Aaron L. Fogelson

No quantum system can be considered totally isolated from its environment. In most cases the interaction between the system of interest and the external degrees of freedom deeply changes its dynamics, as described by open quantum system…

The Lindblad form of the master equation has proven to be one of the most convenient ways to describe the impact of an environment interacting with a quantum system of interest. For single systems the jump operators characterizing these…

Quantum Physics · Physics 2021-12-02 Ralf Betzholz , Bruno G. Taketani , Juan Mauricio Torres

The immersed boundary (IB) method is a mathematical framework for fluid-structure interaction problems (FSI) that was originally developed to simulate flows around heart valves. Direct comparison of FSI simulations around heart valves…

We propose a hemodynamic reduced-order model bridging macroscopic and meso-scopic blood flow circulation scales from arteries to capillaries. In silico tree like vascular geometries, mathematically described by graphs, are synthetically…

Medical Physics · Physics 2019-07-29 Olivier Adjoua , Stéphanie Pitre-Champagnat , Didier Lucor

Computer modeling of the cardiovascular system has potential to revolutionize personalized medical care. This is especially promising for congenital heart defects, such as ventricular septal defect (VSD), a hole between the two ventricles…

Tissues and Organs · Quantitative Biology 2026-02-05 Mitchel J. Colebank , Alfonso Limon , Anthony Chang , Brandon Wong , Wyman Lai , Hamilton Baker

Hybrid models composing mechanistic ODE-based dynamics with flexible and expressive neural network components have grown rapidly in popularity, especially in scientific domains where such ODE-based modeling offers important interpretability…

Machine Learning · Computer Science 2026-02-02 Bob Junyi Zou , Matthew E. Levine , Dessi P. Zaharieva , Ramesh Johari , Emily B. Fox

In this paper we present a model for the kinematics and dynamics of optomechanics which describe the coupling between an optical field, here modeled by a massless scalar field, and the internal (e.g., determining its reflectivity) and…

Quantum Physics · Physics 2013-05-01 Chad R. Galley , Ryan O. Behunin , B. L. Hu

Electroanatomical mapping, a keystone diagnostic tool in cardiac electrophysiology studies, can provide high-density maps of the local electric properties of the tissue. It is therefore tempting to use such data to better individualize…

Optimization and Control · Mathematics 2021-02-03 Thomas Grandits , Simone Pezzuto , Jolijn M. Lubrecht , Thomas Pock , Gernot Plank , Rolf Krause

Future health systems require the means to assess and track the neural and physiological function of a user over long periods of time and in the community. Human body responses are manifested through multiple modalities, such as the…

With a kind of magnetism, the human retina draws the eye of neuroscientist and physicist alike. It is attractive as a self-organizing system, which forms as a part of the central nervous system via biochemical and mechanical cues. The…

Tissues and Organs · Quantitative Biology 2022-01-19 Katja A. Salbaum , Elijah R. Shelton , Friedhelm Serwane

We propose a suite of technologies for analyzing the interaction between anisotropic arterial walls and blood flow for subject-specific geometries. Utilizing an established lumen modeling strategy, we present a comprehensive pipeline for…

Medical Physics · Physics 2024-06-21 Yujie Sun , Jiayi Huang , Qingshuang Lu , Xinhai Yue , Xuanming Huang , Wei He , Yun Shi , Ju Liu

Radiation pressure can be used to enable optomechanical control and manipulation of the quantum state of a mechanical oscillator. Optomechanical interaction can also be mediated by photothermal effects which, although frequently overlooked,…

In a two-membrane cavity optomechanical setup, two semi-transparent membranes placed within an optical Fabry-P\'erot cavity yield a nontrivial dependence of the frequency of a mode of the optical cavity on the membranes' positions, which is…

Baroreflex (BR) and cerebral autoregulation (CA) are two important mechanisms regulating blood pressure and flow. However, the functional relationship between BR and CA in humans is unknown. Since BR impairment is an adverse prognostic…

Tissues and Organs · Quantitative Biology 2015-12-16 Adam Mahdi , Mette S. Olufsen , Stephen J. Payne

This work addresses the inverse problem of electrocardiography from a new perspective, by combining electrical and mechanical measurements. Our strategy relies on the defini-tion of a model of the electromechanical contraction which is…

Numerical Analysis · Mathematics 2015-03-24 Cesare Corrado , Jean-Frédéric Gerbeau , Philippe Moireau

When modelling tissue-level cardiac electrophysiology, continuum approximations to the discrete cell-level equations are used to maintain computational tractability. One of the most commonly used models is represented by the bidomain…

Computational Engineering, Finance, and Science · Computer Science 2012-08-22 Doug Bruce , Pras Pathmanathan , Jonathan P. Whiteley

Many drugs have been withdrawn from the market worldwide, at a cost of billions of dollars, because of patient fatalities due to them unexpectedly disturbing heart rhythm. Even drugs for ailments as mild as hay fever have been withdrawn due…

Cell Behavior · Quantitative Biology 2025-04-25 Gary R. Mirams