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We describe a new methodology for studying persistence of topological features across a family of spaces or point-cloud data sets, called zigzag persistence. Building on classical results about quiver representations, zigzag persistence…

Computational Geometry · Computer Science 2008-12-02 Gunnar Carlsson , Vin de Silva

Three novel applications of computational topology in the field of fusion science are developed. A procedure for the automatic classification of the orbits of magnetic field lines into topologically distinct classes using Vietoris-Rips…

Plasma Physics · Physics 2024-10-25 Nicholas Bohlsen

A fundamental tool in topological data analysis is persistent homology, which allows extraction of information from complex datasets in a robust way. Persistent homology assigns a module over a principal ideal domain to a one-parameter…

Algebraic Topology · Mathematics 2019-06-19 Heather A. Harrington , Nina Otter , Hal Schenck , Ulrike Tillmann

Persistent homology is a topological data analysis tool that has been widely generalized, extending its scope beyond the field of topology. Among its extensions, steady and ranging persistence were developed to study a wide variety of graph…

Algebraic Topology · Mathematics 2026-05-15 Yann-Situ Gazull

Persistent homology is a technique recently developed in algebraic and computational topology well-suited to analysing structure in complex, high-dimensional data. In this paper, we exposit the theory of persistent homology from first…

Applications · Statistics 2016-11-30 Matthew Pietrosanu

We study the probabilistic behavior of persistence-based statistics and propose a novel nonparametric framework for detecting structural changes in high-dimensional random point clouds. We establish moment bounds and tightness results for…

Statistics Theory · Mathematics 2025-12-30 Toshiyuki Nakayama

Many attempts have been made in recent decades to integrate machine learning (ML) and topological data analysis. A prominent problem in applying persistent homology to ML tasks is finding a vector representation of a persistence diagram…

Machine Learning · Computer Science 2022-04-25 Zhetong Dong , Hongwei Lin , Chi Zhou

Topological data analysis is a relatively new branch of machine learning that excels in studying high dimensional data, and is theoretically known to be robust against noise. Meanwhile, data objects with mixed numeric and categorical…

Algebraic Topology · Mathematics 2020-06-15 Chengyuan Wu , Carol Anne Hargreaves

Topological data analysis (TDA), while abstract, allows a characterization of time-series data obtained from nonlinear and complex dynamical systems. Though it is surprising that such an abstract measure of structure - counting pieces and…

Computational Geometry · Computer Science 2020-01-07 Nicole Sanderson , Elliott Shugerman , Samantha Molnar , James D. Meiss , Elizabeth Bradley

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

Algebraic Topology · Mathematics 2020-07-31 Padraig Corcoran

Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

Computational Geometry · Computer Science 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

Topological Data Analysis (TDA) can broadly be described as a collection of data analysis methods that find structure in data. This includes: clustering, manifold estimation, nonlinear dimension reduction, mode estimation, ridge estimation…

Methodology · Statistics 2016-09-28 Larry Wasserman

Persistent Homology (PH) is a fundamental tool in computational topology, designed to uncover the intrinsic geometric and topological features of data across multiple scales. Originating within the broader framework of Topological Data…

Algebraic Topology · Mathematics 2025-05-13 Aurelie Jodelle Kemme , Collins Amburo Agyingi

In a world abundant with diverse data arising from complex acquisition techniques, there is a growing need for new data analysis methods. In this paper we focus on high-dimensional data that are organized into several hierarchical datasets.…

Machine Learning · Computer Science 2021-04-06 Lior Aloni , Omer Bobrowski , Ronen Talmon

Persistence has proved to be a valuable tool to analyze real world data robustly. Several approaches to persistence have been attempted over time, some topological in flavor, based on the vector space-valued homology functor, other…

Algebraic Topology · Mathematics 2019-05-23 Mattia G. Bergomi , Pietro Vertechi

Persistence diagrams serve as a core tool in topological data analysis, playing a crucial role in pathological monitoring, drug discovery, and materials design. However, existing quantum topological algorithms, such as the LGZ algorithm,…

Quantum Physics · Physics 2025-12-03 Dong Liu

Recently, Suwayyid and Wei have introduced commutative algebra as an emerging paradigm for machine learning and data science. In this work, we integrate commutative algebra machine learning (CAML) for the prediction of protein-ligand…

Biomolecules · Quantitative Biology 2025-04-29 Hongsong Feng , Faisal Suwayyid , Mushal Zia , JunJie Wee , Yuta Hozumi , Chunlong Chen , Guo-Wei Wei

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of…

Topological data analysis (TDA) has become an attractive area for the application of quantum computing. Recent advances have uncovered many interesting connections between the two fields. On one hand, complexity theoretic results show that…

Quantum Physics · Physics 2025-11-06 Nhat A. Nghiem

This book gives a thorough introduction to topological data analysis (TDA), the application of algebraic topology to data science. Algebraic topology is traditionally a very specialized field of math, and most mathematicians have never been…

Algebraic Topology · Mathematics 2024-12-30 Michael S. Postol
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