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Causal structure discovery from observations can be improved by integrating background knowledge provided by an expert to reduce the hypothesis space. Recently, Large Language Models (LLMs) have begun to be considered as sources of prior…

Machine Learning · Computer Science 2024-05-24 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

Advanced Persistent Threats (APTs) are prolonged, stealthy intrusions by skilled adversaries that compromise high-value systems to steal data or disrupt operations. Reconstructing complete attack chains from massive, heterogeneous logs is…

Cryptography and Security · Computer Science 2025-09-03 Rujie Dai , Peizhuo Lv , Yujiang Gui , Qiujian Lv , Yuanyuan Qiao , Yan Wang , Degang Sun , Weiqing Huang , Yingjiu Li , XiaoFeng Wang

The rise of Large Language Models (LLMs) offers transformative potential for interpreting complex legal frameworks, such as Title 18 Section 175 of the US Code, which governs biological weapons. These systems hold promise for advancing…

Computation and Language · Computer Science 2025-11-13 Abha Jha , Abel Salinas , Fred Morstatter

Recent advancements in Large Language Models (LLMs) have transformed Natural Language Processing (NLP), enabling complex information retrieval and generation tasks. Retrieval-Augmented Generation (RAG) has emerged as a key innovation,…

Information Retrieval · Computer Science 2026-02-27 Teri Rumble , Zbyněk Gazdík , Javad Zarrin , Jagdeep Ahluwalia

Retrieval Augmented Generation (RAG) improves correctness of Question Answering (QA) and addresses hallucinations in Large Language Models (LLMs), yet greatly increase computational costs. Besides, RAG is not always needed as may introduce…

The development of large language models (LLMs) has provided new tools for research in supply chain management (SCM). In this paper, we introduce a retrieval-augmented generation (RAG) framework that dynamically integrates external…

Artificial Intelligence · Computer Science 2025-05-27 Haojie Wang , Jiuyun Jiang , L. Jeff Hong , Guangxin Jiang

Large Language Models (LLMs) demonstrate strong reasoning abilities but face limitations such as hallucinations and outdated knowledge. Knowledge Graph (KG)-based Retrieval-Augmented Generation (RAG) addresses these issues by grounding LLM…

Computation and Language · Computer Science 2025-03-04 Mufei Li , Siqi Miao , Pan Li

Retrieval-Augmented Generation (RAG) has been empirically shown to enhance the performance of large language models (LLMs) in knowledge-intensive domains such as healthcare, finance, and legal contexts. Given a query, RAG retrieves relevant…

Cryptography and Security · Computer Science 2025-06-02 Xun Xian , Ganghua Wang , Xuan Bi , Jayanth Srinivasa , Ashish Kundu , Charles Fleming , Mingyi Hong , Jie Ding

Knowledge Graph-based recommendations have gained significant attention due to their ability to leverage rich semantic relationships. However, constructing and maintaining Knowledge Graphs (KGs) is resource-intensive, and the accuracy of…

Information Retrieval · Computer Science 2025-02-07 Rui Cai , Chao Wang , Qianyi Cai , Dazhong Shen , Hui Xiong

Adversarial attacks on knowledge graph embeddings (KGE) aim to disrupt the model's ability of link prediction by removing or inserting triples. A recent black-box method has attempted to incorporate textual and structural information to…

Computation and Language · Computer Science 2025-10-15 Ting Li , Yang Yang , Yipeng Yu , Liang Yao , Guoqing Chao , Ruifeng Xu

Retrieval Augmented Generation (RAG) has gradually emerged as a promising paradigm for enhancing the accuracy and factual consistency of content generated by large language models (LLMs). However, existing RAG studies primarily focus on…

Information Retrieval · Computer Science 2025-07-24 Qikai Wei , Huansheng Ning , Chunlong Han , Jianguo Ding

Retrieval-augmented generation (RAG) is a promising method for addressing some of the memory-related challenges associated with Large Language Models (LLMs). Two separate systems form the RAG pipeline, the retriever and the reader, and the…

Computation and Language · Computer Science 2024-11-13 Alexandria Leto , Cecilia Aguerrebere , Ishwar Bhati , Ted Willke , Mariano Tepper , Vy Ai Vo

Graph Machine Learning (GML) is receiving growing interest within the pharmaceutical and biotechnology industries for its ability to model biomolecular structures, the functional relationships between them, and integrate multi-omic datasets…

The integration of Artificial Intelligence (AI) into the field of drug discovery has been a growing area of interdisciplinary scientific research. However, conventional AI models are heavily limited in handling complex biomedical structures…

Machine Learning · Computer Science 2024-07-25 Zhiqiang Zhong , Anastasia Barkova , Davide Mottin

The vast amount of biomedical information available today presents a significant challenge for investigators seeking to digest, process, and understand these findings effectively. Large Language Models (LLMs) have emerged as powerful tools…

Computation and Language · Computer Science 2024-07-19 Alexander R. Pelletier , Joseph Ramirez , Irsyad Adam , Simha Sankar , Yu Yan , Ding Wang , Dylan Steinecke , Wei Wang , Peipei Ping

Automated data preparation is crucial for democratizing machine learning, yet existing reinforcement learning (RL) based approaches suffer from inefficient exploration in the vast space of possible preprocessing pipelines. We present…

Databases · Computer Science 2025-07-21 Jing Chang , Chang Liu , Jinbin Huang , Rui Mao , Jianbin Qin

Biomedical knowledge graphs (KGs) encode rich, structured information critical for drug discovery tasks, but extracting meaningful insights from large-scale KGs remains challenging due to their complex structure. Existing biomedical…

We introduce a novel graph-based Retrieval-Augmented Generation (RAG) framework specifically designed for the medical domain, called \textbf{MedGraphRAG}, aimed at enhancing Large Language Model (LLM) capabilities for generating…

Computer Vision and Pattern Recognition · Computer Science 2024-10-17 Junde Wu , Jiayuan Zhu , Yunli Qi , Jingkun Chen , Min Xu , Filippo Menolascina , Vicente Grau

Biomedical knowledge graphs (KGs) hold rich information on entities such as diseases, drugs, and genes. Predicting missing links in these graphs can boost many important applications, such as drug design and repurposing. Recent work has…

Computation and Language · Computer Science 2021-09-22 Rahul Nadkarni , David Wadden , Iz Beltagy , Noah A. Smith , Hannaneh Hajishirzi , Tom Hope

Large language models (LLMs) frequently generate confident yet factually incorrect content when used for language generation (a phenomenon often known as hallucination). Retrieval augmented generation (RAG) tries to reduce factual errors by…

Information Retrieval · Computer Science 2026-04-01 Dobrik Georgiev , Kheeran Naidu , Alberto Cattaneo , Federico Monti , Carlo Luschi , Daniel Justus