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We address the selection and evaluation of uncertain segmentation methods in medical imaging and present two case studies: prostate segmentation, illustrating that for minimal annotator variation simple deterministic models can suffice, and…

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Compressed sensing can decrease scanning transmission electron microscopy electron dose and scan time with minimal information loss. Traditionally, sparse scans used in compressed sensing sample a static set of probing locations. However,…

Machine Learning · Computer Science 2021-03-12 Jeffrey M. Ede

Adapting Vision Language Segmentation Models (VLSMs) to medical imaging domains requires significant computational overhead when using conventional fine-tuning approaches. Existing Parameter-Efficient Fine-Tuning (PEFT) methods apply…

Computer Vision and Pattern Recognition · Computer Science 2026-04-03 Ujjwal Mishra , Vinita Shukla , Praful Hambarde , Amit Shukla

Test-time adaptive (TTA) semantic segmentation adapts a source pre-trained image semantic segmentation model to unlabeled batches of target domain test images, different from real-world, where samples arrive one-by-one in an online fashion.…

Computer Vision and Pattern Recognition · Computer Science 2023-03-01 Debasmit Das , Shubhankar Borse , Hyojin Park , Kambiz Azarian , Hong Cai , Risheek Garrepalli , Fatih Porikli

Medical Foundation Models (MFMs), trained on large-scale datasets, have demonstrated superior performance across various tasks. However, these models still struggle with domain gaps in practical applications. Specifically, even after…

Computer Vision and Pattern Recognition · Computer Science 2025-03-04 Jia-Xuan Jiang , Wenhui Lei , Yifeng Wu , Hongtao Wu , Furong Li , Yining Xie , Xiaofan Zhang , Zhong Wang

Medical image segmentation plays a crucial role in clinical diagnosis and treatment planning. Although models based on convolutional neural networks (CNNs) and Transformers have achieved remarkable success in medical image segmentation…

Image and Video Processing · Electrical Eng. & Systems 2024-10-04 Jiashu Xu

The successful adaptation of foundation models to multi-modal medical imaging is a critical yet unresolved challenge. Existing models often struggle to effectively fuse information from multiple sources and adapt to the heterogeneous nature…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Shadi Alijani , Fereshteh Aghaee Meibodi , Homayoun Najjaran

Robust and generalizable segmentation of brain tumors on multi-parametric magnetic resonance imaging (MRI) remains difficult because tumor types differ widely. The BraTS 2025 Lighthouse Challenge benchmarks segmentation methods on diverse…

Generative models have achieved remarkable progress with the emergence of flow matching (FM). It has demonstrated strong generative capabilities and attracted significant attention as a simulation-free flow-based framework capable of…

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Domain shift presents a significant challenge in applying Deep Learning to the segmentation of 3D medical images from sources like Magnetic Resonance Imaging (MRI) and Computed Tomography (CT). Although numerous Domain Adaptation methods…

Image and Video Processing · Electrical Eng. & Systems 2025-02-25 Boris Shirokikh , Anvar Kurmukov , Mariia Donskova , Valentin Samokhin , Mikhail Belyaev , Ivan Oseledets

The widespread application of Electronic Health Records (EHR) data in the medical field has led to early successes in disease risk prediction using deep learning methods. These methods typically require extensive data for training due to…

Machine Learning · Computer Science 2024-11-28 Shibo Li , Hengliang Cheng , Weihua Li

Medical image segmentation is a vital healthcare endeavor requiring precise and efficient models for appropriate diagnosis and treatment. Vision transformer (ViT)-based segmentation models have shown great performance in accomplishing this…

Computer Vision and Pattern Recognition · Computer Science 2023-08-03 Numan Saeed , Muhammad Ridzuan , Roba Al Majzoub , Mohammad Yaqub

In medical contexts, the imbalanced data distribution in long-tailed datasets, due to scarce labels for rare diseases, greatly impairs the diagnostic accuracy of deep learning models. Recent multimodal text-image supervised foundation…

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Accurate medical image segmentation is essential for effective diagnosis and treatment planning but is often challenged by domain shifts caused by variations in imaging devices, acquisition conditions, and patient-specific attributes.…

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Domain adaptation methods aim to bridge the gap between datasets by enabling knowledge transfer across domains, reducing the need for additional expert annotations. However, many approaches struggle with reliability in the target domain, an…

Image and Video Processing · Electrical Eng. & Systems 2026-05-14 Arnaud Judge , Nicolas Duchateau , Thierry Judge , Roman A. Sandler , Joseph Z. Sokol , Christian Desrosiers , Olivier Bernard , Pierre-Marc Jodoin

Foundation models (FMs) have demonstrated strong transferability across medical imaging tasks, yet their clinical utility depends critically on how pretrained representations are adapted to domain-specific data, supervision regimes, and…

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Despite the popularity and empirical success of patch-based nearest-neighbor and weighted majority voting approaches to medical image segmentation, there has been no theoretical development on when, why, and how well these nonparametric…

Computer Vision and Pattern Recognition · Computer Science 2015-10-07 George Chen , Devavrat Shah , Polina Golland

Promptable segmentation foundation models have emerged as a transformative approach to addressing the diverse needs in medical images, but most existing models require expensive computing, posing a big barrier to their adoption in clinical…

Predicting drug response in patients from preclinical data remains a major challenge in precision oncology due to the substantial biological gap between in vitro cell lines and patient tumors. Rather than aiming to improve absolute in vitro…

Machine Learning · Computer Science 2026-03-18 Camille Jimenez Cortes , Philippe Lalanda , German Vega

The performance of deep segmentation models often degrades due to distribution shifts in image intensities between the training and test data sets. This is particularly pronounced in multi-centre studies involving data acquired using…

Image and Video Processing · Electrical Eng. & Systems 2021-08-03 Zhendong Liu , Van Manh , Xin Yang , Xiaoqiong Huang , Karim Lekadir , Víctor Campello , Nishant Ravikumar , Alejandro F Frangi , Dong Ni