Related papers: HiCMamba: Enhancing Hi-C Resolution and Identifyin…
To better understand DNA's 3D folding in cell nuclei, researchers developed chromosome capture methods such as Hi-C that measure the contact frequencies between all DNA segment pairs across the genome. As Hi-C data sets often are massive,…
To understand the nature of a cell, one needs to understand the structure of its genome. For this purpose, experimental techniques such as Hi-C detecting chromosomal contacts are used to probe the three-dimensional genomic structure. These…
Classifying hyperspectral images is a difficult task in remote sensing, due to their complex high-dimensional data. To address this challenge, we propose HSIMamba, a novel framework that uses bidirectional reversed convolutional neural…
Chromatin conformation capture technologies such as Hi-C have revealed that the genome is organized in a hierarchy of structures spanning multiple scales observed at different resolutions. Current algorithms often focus on specific…
Researchers developed chromosome capture methods such as Hi-C to better understand DNA's 3D folding in nuclei. The Hi-C method captures contact frequencies between DNA segment pairs across the genome. When analyzing Hi-C data sets, it is…
Accurate organ and lesion segmentation is a critical prerequisite for computer-aided diagnosis. Convolutional Neural Networks (CNNs), constrained by their local receptive fields, often struggle to capture complex global anatomical…
Remote sensing image fusion aims to generate a high-resolution multi/hyper-spectral image by combining a high-resolution image with limited spectral data and a low-resolution image rich in spectral information. Current deep learning (DL)…
3D human pose lifting is a promising research area that leverages estimated and ground-truth 2D human pose data for training. While existing approaches primarily aim to enhance the performance of estimated 2D poses, they often struggle when…
Hyperspectral image (HSI) classification constitutes the fundamental research in remote sensing fields. Convolutional Neural Networks (CNNs) and Transformers have demonstrated impressive capability in capturing spectral-spatial contextual…
Effectively modeling global context information in hyperspectral image (HSI) denoising is crucial, but prevailing methods using convolution or transformers still face localized or computational efficiency limitations. Inspired by the…
In the domain of 3D biomedical image segmentation, Mamba exhibits the superior performance for it addresses the limitations in modeling long-range dependencies inherent to CNNs and mitigates the abundant computational overhead associated…
Understanding the three-dimensional (3D) structure of the genome is essential for elucidating vital biological processes and their links to human disease. To determine how the genome folds within the nucleus, chromosome conformation capture…
The probability of two loci, separated by a certain genome length, being in contact can be inferred using the Chromosome Conformation Capture (3C) method and related Hi-C experiments. How to go from the contact map, a matrix listing the…
State Space Models (SSM), such as Mamba, have shown strong representation ability in modeling long-range dependency with linear complexity, achieving successful applications from high-level to low-level vision tasks. However, SSM's…
Hyperspectral Imaging (HSI) has proven to be a powerful tool for capturing detailed spectral and spatial information across diverse applications. Despite the advancements in Deep Learning (DL) and Transformer architectures for HSI…
Mamba has demonstrated exceptional performance in visual tasks due to its powerful global modeling capabilities and linear computational complexity, offering considerable potential in hyperspectral image super-resolution (HSISR). However,…
Several experiments show that the three dimensional (3D) organization of chromosomes affects genetic processes such as transcription and gene regulation. To better understand this connection, researchers developed the Hi-C method that is…
The 3-dimensional (3D) structure of the genome is of significant importance for many cellular processes. In this paper, we study the problem of reconstructing the 3D structure of chromosomes from Hi-C data of diploid organisms, which poses…
Multimodal fusion has made great progress in the field of remote sensing image classification due to its ability to exploit the complementary spatial-spectral information. Deep learning methods such as CNN and Transformer have been widely…
Hyperspectral object tracking holds great promise due to the rich spectral information and fine-grained material distinctions in hyperspectral images, which are beneficial in challenging scenarios. While existing hyperspectral trackers have…