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The birth/death process with mutation describes the evolution of a population, and displays rich dynamics including clustering and fluctuations. We discuss an analytical `field-theoretical' approach to the birth/death process, using a…

Populations and Evolution · Quantitative Biology 2007-11-20 Daniel John Lawson , Henrik Jeldtoft Jensen

The advent of modern genome sequencing techniques allows for a more stringent test of the neutrality hypothesis of Darwinian evolution, where all individuals have the same fitness. Using the individual based model of Wright and Fisher, we…

Populations and Evolution · Quantitative Biology 2017-02-01 Bahram Houchmandzadeh

Competition is the main driver of population dynamics, which shapes the genetic composition of populations and the assembly of ecological communities. Neutral models assume that all the individuals are equivalent and that the dynamics is…

Populations and Evolution · Quantitative Biology 2018-04-11 Matan Danino , Nadav M. Shnerb

Phenotypically structured equations arise in population biology to describe the interaction of species with their environment that brings the nutrients. This interaction usually leads to selection of the fittest individuals. Models used in…

Analysis of PDEs · Mathematics 2015-06-18 Alexander Lorz , Benoit Perthame

In the presence of persistent payoff heterogeneity, the evolution of the aggregate strategy hugely depends on the underlying strategy composition under many evolutionary dynamics, while the aggregate dynamic under the standard BRD reduces…

Computer Science and Game Theory · Computer Science 2018-11-01 Dai Zusai

The topological structure of complex networks has fascinated researchers for several decades, resulting in the discovery of many universal properties and reoccurring characteristics of different kinds of networks. However, much less is…

Social and Information Networks · Computer Science 2017-06-28 Yvonne Anne Pignolet , Matthieu Roy , Stefan Schmid , Gilles Tredan

The topological structure of complex networks has fascinated researchers for several decades, resulting in the discovery of many universal properties and reoccurring characteristics of different kinds of networks. However, much less is…

Social and Information Networks · Computer Science 2017-03-02 Yvonne Anne Pignolet , Matthieu Roy , Stefan Schmid , Gilles Tredan

Evolutionary dynamics have been traditionally studied in the context of homogeneous populations, mainly described my the Moran process. Recently, this approach has been generalized in \cite{LHN} by arranging individuals on the nodes of a…

Discrete Mathematics · Computer Science 2012-06-22 George B. Mertzios , Sotiris Nikoletseas , Christoforos Raptopoulos , Paul G. Spirakis

When three species compete cyclically in a well-mixed, stochastic system of $N$ individuals, extinction is known to typically occur at times scaling as the system size $N$. This happens, for example, in rock-paper-scissors games or…

Physics and Society · Physics 2019-02-20 Kevin E. Bassler , Erwin Frey , R. K. P. Zia

Population structure and spatial heterogeneity are integral components of evolutionary dynamics, in general, and of evolution of cooperation, in particular. Structure can promote the emergence of cooperation in some populations and suppress…

Populations and Evolution · Quantitative Biology 2017-10-10 Yu-Ting Chen , Alex McAvoy , Martin A. Nowak

To understand the mechanisms underlying species coexistence, ecologists often study invasion growth rates of theoretical and data-driven models. These growth rates correspond to average per-capita growth rates of one species with respect to…

Populations and Evolution · Quantitative Biology 2022-08-02 Josef Hofbauer , Sebastian J. Schreiber

Spatial distribution of the human population is distinctly heterogeneous, e.g. showing significant difference in the population density between urban and rural areas. In the historical perspective, i.e. on the timescale of centuries, the…

Adaptation and Self-Organizing Systems · Physics 2022-08-30 Anna Zincenko , Sergei Petrovskii , Vitaly Volpert

We study spreading processes in temporal graphs, i. e., graphs whose connections change over time. These processes naturally model real-world phenomena such as infectious diseases or information flows. More precisely, we investigate how…

Data Structures and Algorithms · Computer Science 2021-07-21 Hendrik Molter , Malte Renken , Philipp Zschoche

Coalescing random walks is a fundamental stochastic process, where a set of particles perform independent discrete-time random walks on an undirected graph. Whenever two or more particles meet at a given node, they merge and continue as a…

Discrete Mathematics · Computer Science 2018-11-05 Varun Kanade , Frederik Mallmann-Trenn , Thomas Sauerwald

Spatially resolved genetic data is increasingly used to reconstruct the migrational history of species. To assist such inference, we study, by means of simulations and analytical methods, the dynamics of neutral gene frequencies in a…

Populations and Evolution · Quantitative Biology 2008-01-15 Oskar Hallatschek , David R. Nelson

Multivariate time series forecasting enables the prediction of future states by leveraging historical data, thereby facilitating decision-making processes. Each data node in a multivariate time series encompasses a sequence of multiple…

Machine Learning · Computer Science 2025-05-02 Xinlong Zhao , Liying Zhang , Tianbo Zou , Yan Zhang

We consider two-opinion voter models on dense dynamic random graphs. Our goal is to understand and describe the occurrence of consensus versus polarisation over long periods of time. The former means that all vertices have the same opinion,…

Probability · Mathematics 2024-10-29 Simone Baldassarri , Peter Braunsteins , Frank den Hollander , Michel Mandjes

When biological populations expand into new territory, the evolutionary outcomes can be strongly influenced by genetic drift, the random fluctuations in allele frequencies. Meanwhile, spatial variability in the environment can also…

Populations and Evolution · Quantitative Biology 2024-06-27 Jimmy Gonzalez Nuñez , Jayson Paulose , Wolfram Möbius , Daniel A. Beller

Identifying and representing clusters in time-varying network data is of particular importance when studying collective behaviors emerging in nature, in mobile device networks or in social networks. Based on combinatorial, categorical, and…

Algebraic Topology · Mathematics 2022-02-15 Woojin Kim , Facundo Mémoli

In order to accommodate the empirical fact that population structures are rarely simple, modern studies of evolutionary dynamics allow for complicated and highly-heterogeneous spatial structures. As a result, one of the most difficult…

Populations and Evolution · Quantitative Biology 2022-07-07 Alex McAvoy , John Wakeley