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Phylogenetic Diversity(PD)is a well-regarded measure of the overall biodiversity of a set of present-day species(taxa)that indicates its ecological significance.In the Maximize Phylogenetic Diversity(Max-PD)problem one is asked to find a…

Discrete Mathematics · Computer Science 2025-10-29 Jannik Schestag

This paper is devoted to the long-term dynamics of solutions to the Gurtin-MacCamy population model with a bistable birth function. We consider a one-parameter monotone family of initial distributions for the population such that for small…

Analysis of PDEs · Mathematics 2026-02-09 Quentin Griette , Franco Herrera

Hubbell's neutral theory of biodiversity has successfully explained the observed composition of many ecological communities but it relies on strict demographic equivalence among species and provides no room for evolutionary processes like…

Populations and Evolution · Quantitative Biology 2012-11-16 David A. Kessler , Nadav M. Shnerb

We present a rapid binary evolution algorithm that enables modelling of even the most complex binary systems. In addition to all aspects of single star evolution, features such as mass transfer, mass accretion, common-envelope evolution,…

Astrophysics · Physics 2009-11-07 Jarrod R. Hurley , Christopher A. Tout , Onno R. Pols

Hypergraphs have been a useful tool for analyzing population dynamics such as opinion formation and the public goods game occurring in overlapping groups of individuals. In the present study, we propose and analyze evolutionary dynamics on…

Physics and Society · Physics 2023-10-16 Ruodan Liu , Naoki Masuda

Predicting the adaptation of populations to a changing environment is crucial to assess the impact of human activities on biodiversity. Many theoretical studies have tackled this issue by modeling the evolution of quantitative traits…

Analysis of PDEs · Mathematics 2022-06-28 Jimmy Garnier , O Cotto , T Bourgeron , E Bouin , T Lepoutre , O Ronce , V Calvez

Collective cooperation drives the dynamics of many natural, social, and economic phenomena, making understanding the evolution of cooperation with evolutionary game theory a central question of modern science. Although human interactions…

Physics and Society · Physics 2024-04-12 Yao Meng , Alex McAvoy , Aming Li

We study the competition and the evolution of nodes embedded in Euclidean restricted spaces. The population evolves by a branching process in which new nodes are generated when up to two new nodes are attached to the previous ones at each…

Populations and Evolution · Quantitative Biology 2014-07-21 Fabricio L. Forgerini , Nuno Crokidakis

In this paper, we study the null controllability of a nonlinear age, space and two-sex structured population dynamics model. This model is such that the nonlinearity and the couplage are at birth level. We consider a population with males…

Analysis of PDEs · Mathematics 2020-09-10 Simporé Yacouba , Traoré Oumar

Moran Birth-death process is a standard stochastic process that is used to model natural selection in spatially structured populations. A newly occurring mutation that invades a population of residents can either fixate on the whole…

Populations and Evolution · Quantitative Biology 2024-10-15 Lenka Kopfová , Josef Tkadlec

We propose a strengthening of the conclusion in Tur\'an's (3,4)-conjecture in terms of algebraic shifting, and show that its analogue for graphs does hold. In another direction, we generalize the Mantel-Tur\'an theorem by weakening its…

Combinatorics · Mathematics 2018-02-13 Gil Kalai , Eran Nevo

The time evolution of spatial fluctuations in inhomogeneous d-dimensional biological systems is analyzed. A single species continuous growth model, in which the population disperses via diffusion and convection is considered.…

Disordered Systems and Neural Networks · Physics 2009-10-30 David R. Nelson , Nadav M. Shnerb

We study the probabilistic evolution of a birth and death continuous time measure-valued process with mutations and ecological interactions. The individuals are characterized by (phenotypic) traits that take values in a compact metric…

Probability · Mathematics 2009-04-23 Pierre Collet , Servet Martinez , Sylvie Méléard , Jaime San Martin

We consider a system of interacting Fisher-Wright diffusions with seed-bank. Individuals live in colonies and are subject to resampling and migration as long as they are active. Each colony has a structured seed-bank into which individuals…

Probability · Mathematics 2020-04-30 Andreas Greven , Frank den Hollander , Margriet Oomen

Chronic viral infections can persist in an infected person for decades. From the perspective of the virus, a single infection can span thousands of generations, leading to a highly diverse population of viruses with its own complex…

Populations and Evolution · Quantitative Biology 2023-05-30 Dmitry Gromov , Ethan O. Romero-Severson

Temporal graphs represent interactions between entities over the time. These interactions may be direct (a contact between two nodes at some time instant), or indirect, through sequences of contacts called temporal paths (journeys).…

Data Structures and Algorithms · Computer Science 2021-04-01 Luiz F. Afra Brito , Marcelo Albertini , Arnaud Casteigts , Bruno A. N. Travençolo

Graph neural networks (GNNs) have achieved remarkable success in processing graph-structured data across various applications. A critical aspect of real-world graphs is their dynamic nature, where new nodes are continually added and…

Machine Learning · Computer Science 2025-09-09 Huayi Tang , Yong Liu

In this paper we develop a novel Topological Data Analysis (TDA) approach for studying graph representations of time series of dynamical systems. Specifically, we show how persistent homology, a tool from TDA, can be used to yield a…

Chaotic Dynamics · Physics 2020-01-28 Audun Myers , Elizabeth Munch , Firas A. Khasawneh

Rapid developments in genetics and biology have led to phylogenetic methods becoming an important direction in the study of cancer and viral evolution. Although our understanding of gene biology and biochemistry has increased and is…

Algebraic Geometry · Mathematics 2020-06-09 Yingying Wu , Shing-Tung Yau

We investigate the behavior of a simple majority dynamics on networks of agents whose interaction topology exhibits a community structure. By leveraging recent advancements in the analysis of dynamics, we prove that, when the states of the…

Social and Information Networks · Computer Science 2018-12-12 Emilio Cruciani , Emanuele Natale , Giacomo Scornavacca
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