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Plant-frugivore interactions play a central role for plant persistence and spatial distribution by promoting the long-range dispersal of seeds by frugivores. However, plant-frugivore interactions are increasingly being threatened by…

Populations and Evolution · Quantitative Biology 2023-09-06 Mozzamil Mohammed , Åke Brännström , Pietro Landi , Ulf Dieckmann

As antibiotic resistance grows more frequent for common bacterial infections, alternative treatment strategies such as phage therapy have become more widely studied in the medical field. While many studies have explored the efficacy of…

Populations and Evolution · Quantitative Biology 2021-04-20 Kylie J Landa , Lauren M Mossman , Rachel J Whitaker , Zoi Rapti , Sara M Clifton

Sexually transmitted infections (STIs) continue to present a complex and costly challenge to public health programs. The preferences and social dynamics of a population can have a large impact on the course of an outbreak as well as the…

Populations and Evolution · Quantitative Biology 2015-06-30 Michael A. L. Hayashi , Marisa C. Eisenberg

Bacteria and phages have been in an ongoing arms race for billions of years. To resist phages bacteria have evolved numerous defense systems, which nevertheless are still overcome by counter-defense mechanisms of specific phages. These…

Populations and Evolution · Quantitative Biology 2025-08-05 Wenping Cui , Jemma M. Fendley , Sriram Srikant , Boris Shraiman

Upon infection of their bacterial hosts temperate phages must chose between lysogenic and lytic developmental strategies. Here we apply the game-theoretic bet-hedging strategy introduced by Kelly to derive the optimal lysogenic fraction of…

Populations and Evolution · Quantitative Biology 2015-07-15 Sergei Maslov , Kim Sneppen

Pathogenic fungi are a leading cause of crop disease and primarily spread through microscopic, durable spores adapted differentially for both persistence and dispersal. Computational Earth System Models and air pollution models have been…

The cell wall serves as a mechanical protection for the fungi and controls the traffic of molecules entering the cell. However, the optical role of the cell wall has not been fully investigated. In this work, we use a computational…

Biological Physics · Physics 2021-04-23 Lautaro Baró , Andrés E. Dolinko , Sonia Rosenfeldt , Diana C. Skigin , Cecilia Carmarán

Infectious diseases remain one of the major causes of human mortality and suffering. Mathematical models have been established as an important tool for capturing the features that drive the spread of the disease, predicting the progression…

In this paper, we propose a new model for the dynamics of COVID-19 infections. Our approach consists of seven phenotypes: the susceptible humans, exposed humans, infectious humans, the recovered humans, the quarantine population, the…

Populations and Evolution · Quantitative Biology 2020-04-23 Haifa Ben Fredj , Farouk Chérif

We consider a predator-prey population model with prey gathering together for defense purposes. A transmissible unrecoverable disease affects the prey. We characterize the system behavior, establishing that ultimately either only the…

Dynamical Systems · Mathematics 2014-05-19 Elena Cagliero , Ezio Venturino

In this paper we study a mathematical model for an infectious disease such as Cholera without life-time immunity. Due to the different mobility for susceptible, infected human and recovered human hosts, the diffusion coefficients are…

Analysis of PDEs · Mathematics 2020-11-18 Hong-Ming Yin

Laboratory models are often used to understand the interaction of related pathogens via host immunity. For example, recent experiments where ferrets were exposed to two influenza strains within a short period of time have shown how the…

Populations and Evolution · Quantitative Biology 2018-06-06 Ada W. C. Yan , Sophie G. Zaloumis , Julie A. Simpson , James M. McCaw

We propose a multi-patch model of cholera transmission integrating environmental contamination, human mobility, and nutritional vulnerability. The population is stratified by food security status, and transmission occurs via human contact,…

Populations and Evolution · Quantitative Biology 2025-09-09 Jean-Marc Mandeng

Here, we adapt the concept of transformational thermodynamics, whereby the flux of temperature is controlled via anisotropic heterogeneous diffusivity, for the diffusion and transport of mass concentration. The n-dimensional,…

Biological Physics · Physics 2013-02-01 Sebastien Guenneau , Tania Puvirajesinghe

The transition from localized to systemic spreading of bacteria, viruses and other agents is a fundamental problem that spans medicine, ecology, biology and agriculture science. We have conducted experiments and simulations in a simple…

Populations and Evolution · Quantitative Biology 2009-11-10 Anna L. Lin , Bernward A. Mann , Gelsy Torres-Oviedo , Bryan Lincoln , Josef Kas , Harry L. Swinney

Wolbachia infection in Anopheles albimanus mosquitoes can render mosquitoes less capable of spreading malaria. We develop and analyze an ordinary differential equation model to evaluate the effectiveness of Wolbachia-based vector control…

Populations and Evolution · Quantitative Biology 2023-03-10 Daniela Florez , Alyssa Young , Kerlly J. Bernabe , James M. Hyman , Zhuolin Qu

Climate change is intensifying infectious and chronic diseases like malaria and diabetes, respectively, especially among the vulnerable populations. Global temperatures have risen by approximately $0.6^\circ$C since 1950, extending the…

Multiagent Systems · Computer Science 2025-12-16 Shivank , Anurag Singh , Fakhteh Ghanbarnejad , Ajay K Sharma

The jellyfish Clytia hemisphaerica possesses astounding regenerative capacities and is able to close even large wounds within a few hours. This rapid pace of wound closure raises the question whether tissue mechanics, rather than tissue…

Biological Physics · Physics 2026-05-21 Anne Materne , Zhiqi Shen , Chiara Sinigaglia , Carl D. Modes

We present a mathematical model to study the transmission dynamics of soil-transmitted helminth (STH) infections and to assess the impact of community-based water, sanitation, and hygiene (WASH) program interventions. STH infections are a…

Populations and Evolution · Quantitative Biology 2025-08-06 Gonzalo Maximiliano Lopez , Juan Pablo Aparicio

Contact-tracing is an essential tool in order to mitigate the impact of pandemic such as the COVID-19. In order to achieve efficient and scalable contact-tracing in real time, digital devices can play an important role. While a lot of…

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