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The accidental degeneracy appearing in cycloacenes as triplets and quadruplets is explained with the concept of segmentation, introduced here with the aim of describing the effective disconnection of $\pi$ orbitals on these organic…

We present a computational study of the electronic properties of amorphous SiO2. The ionic configurations used are the ones generated by an earlier molecular dynamics simulations in which the system was cooled with different cooling rates…

Disordered Systems and Neural Networks · Physics 2009-10-30 Thorsten Koslowski , Walter Kob , Katharina Vollmayr

The tight-span of a finite metric space is a polytopal complex that has appeared in several areas of mathematics. In this paper we determine the polytopal structure of the tight-span of a totally split decomposable (finite) metric. Totally…

Combinatorics · Mathematics 2018-04-06 K. T. Huber , J. Koolen , V. Moulton

We investigate the mechanical interplay between the spatial organization of the actin cytoskeleton and the shape of animal cells adhering on micropillar arrays. Using a combination of analytical work, computer simulations and in vitro…

With the help of a mathematical model, the metabolic process of the Krebs cycle is studied. The autocatalytic processes resulting in both the formation of the self-organization in the Krebs cycle and the appearance of a cyclicity of its…

Molecular Networks · Quantitative Biology 2017-10-26 V. I. Grytsay , I. V. Musatenko

We develop the Lorentzian geometry of a crooked halfspace in 2+1-dimensional Minkowski space. We calculate the affine, conformal and isometric automorphism groups of a crooked halfspace, and discuss its stratification into orbit types,…

Differential Geometry · Mathematics 2013-05-20 Jean-Philippe Burelle , Virginie Charette , Todd Drumm , William Goldman

In this paper, we list several interesting structures of cyclotomic polynomials: specifically relations among blocks obtained by suitable partition of cyclotomic polynomials. We present explicit and self-contained proof for all of them,…

Number Theory · Mathematics 2017-04-21 Ala'a Al-Kateeb , Hoon Hong , Eunjeong Lee

X-shaped liquid crystalline molecules (XLCMs) are obtained by tethering two flexible end A-blocks and two flexible side B-blocks to a rigid backbone (R). A rich array of ordered structures can be formed from XLCMs, driven by the competition…

Soft Condensed Matter · Physics 2024-10-25 Dan Wei , Zhijuan He , Yunqing Huang , An-Chang Shi , Kai Jiang

The topological organisation of cells in a model of living tissue (the crypt of intestinal epithelium) is identical to the topological organisation of atoms in carbon nanotubes. The existing models of growth of these two structures contain…

Mesoscale and Nanoscale Physics · Physics 2011-06-29 Michael Pyshnov , Sergei Fedorov

We discuss $\mathcal{N}=1$ Klein and Klein-Conformal superspaces in $D=(2,2)$ space-time dimensions, realizing them in terms of their functor of points over the split composition algebra $\mathbb{C}_{s}$. We exploit the observation that…

High Energy Physics - Theory · Physics 2017-05-24 Rita Fioresi , Emanuele Latini , Alessio Marrani

Previously, a seven-cluster pattern claiming to be a universal one in bacterial genomes has been reported. Keeping in mind the most popular theory of chloroplast origin, we checked whether a similar pattern is observed in chloroplast…

Genomics · Quantitative Biology 2018-02-09 Michael Sadovsky , Maria Senashova , Andrew Malyshev

The cell cortex, a thin film of active material assembled below the cell membrane, plays a key role in cellular symmetry breaking processes such as cell polarity establishment and cell division. Here, we present a minimal model of the…

Biological Physics · Physics 2019-09-30 Alexander Mietke , V. Jemseena , K. Vijay Kumar , Ivo F. Sbalzarini , Frank Jülicher

We demonstrate the emergence of the conformal group SO(4,2) from the Clifford algebra of spacetime. The latter algebra is a manifold, called Clifford space, which is assumed to be the arena in which physics takes place. A Clifford space…

High Energy Physics - Theory · Physics 2007-05-23 C. Castro , M. Pavsic

This thesis proposes a framework based on a notion of combinatorial cell complex (cc) whose cells are defined simply as finite sets of vertices. The cells of a cc are subject to four axioms involving a rank function that assigns a rank (or…

Mathematical Physics · Physics 2022-05-03 Maxime Savoy

Carbon is the most important chemical element and the theoretical study of its new allotropes can be of great interest. In this study, regular dodecahedron (dodecahedrane) oligomers (n = 1, 3, 5, 7, 9, 11, 13) by extending the dodecahedrane…

Computational Physics · Physics 2023-11-14 Siavash Hasanvandi , Elham Neisi , José M. De Sousa

We model the electronic properties of thin films of binary compounds with stacked layers where each layer is a two-dimensional honeycomb lattice with two atoms per unit cell. The two atoms per cell are assigned different onsite energies in…

Mesoscale and Nanoscale Physics · Physics 2024-04-15 James H. Muten , Louise H. Frankland , Edward McCann

The possibility of realizing topological insulators by spontaneous formation of electronic superstructure is theoretically investigated in a minimal two-orbital model including both the spin-orbit coupling and electron correlations on a…

Strongly Correlated Electrons · Physics 2016-06-21 Yusuke Sugita , Yukitoshi Motome

Spatial organisation is a hallmark of all living cells, and recreating it in model systems is a necessary step in the creation of synthetic cells. It is therefore of both fundamental and practical interest to better understand the basic…

Biological Physics · Physics 2017-12-19 Jaime Agudo-Canalejo , Ramin Golestanian

Metabolism displays striking and robust regularities in the forms of modularity and hierarchy, whose composition may be compactly described. This renders metabolic architecture comprehensible as a system, and suggests the order in which…

Molecular Networks · Quantitative Biology 2015-06-05 Rogier Braakman , Eric Smith

In this paper we consider the classification of minimal cellular structures of spaces of topological complexity two under some hypotheses on there graded cohomological algebra. This continues the method used by M.Grant et al. in [1].

Algebraic Topology · Mathematics 2016-07-27 A. Boudjaj , Y. Rami
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