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In this paper, we study the representation of neural networks from the view of kernels. We first define the Neural Fisher Kernel (NFK), which is the Fisher Kernel applied to neural networks. We show that NFK can be computed for both…

Machine Learning · Computer Science 2022-02-07 Ruixiang Zhang , Shuangfei Zhai , Etai Littwin , Josh Susskind

Neural networks enjoy widespread use, but many aspects of their training, representation, and operation are poorly understood. In particular, our view into the training process is limited, with a single scalar loss being the most common…

Machine Learning · Computer Science 2020-03-04 Janice Lan , Rosanne Liu , Hattie Zhou , Jason Yosinski

To date, it is still impossible to sample the entire mammalian brain with single-neuron precision. This forces one to either use spikes (focusing on few neurons) or to use coarse-sampled activity (averaging over many neurons, e.g. LFP).…

Neurons and Cognition · Quantitative Biology 2022-12-12 Joao Pinheiro Neto , Franz Paul Spitzner , Viola Priesemann

Coordinate-based meta-analysis combines evidence from a collection of Neuroimaging studies to estimate brain activation. In such analyses, a key practical challenge is to find a computationally efficient approach with good statistical…

Deep networks learn internal representations whose geometry--how features bend, rotate, and evolve--affects both generalization and robustness. Existing similarity measures such as CKA or SVCCA capture pointwise overlap between activation…

Machine Learning · Computer Science 2026-01-30 Vasileios Sevetlidis , George Pavlidis

We propose a new estimator for nonparametric binary choice models that does not impose a parametric structure on either the systematic function of covariates or the distribution of the error term. A key advantage of our approach is its…

Econometrics · Economics 2026-01-13 Guo Yan

For certain infinitely-wide neural networks, the neural tangent kernel (NTK) theory fully characterizes generalization, but for the networks used in practice, the empirical NTK only provides a rough first-order approximation. Still, a…

Machine Learning · Computer Science 2021-10-14 Guillermo Ortiz-Jiménez , Seyed-Mohsen Moosavi-Dezfooli , Pascal Frossard

Plasticity is one of the most important properties of the nervous system, which enables animals to adjust their behavior to the ever-changing external environment. Changes in synaptic efficacy between neurons constitute one of the major…

Neurons and Cognition · Quantitative Biology 2018-01-23 Taishi Iwasaki , Hideitsu Hino , Masami Tatsuno , Shotaro Akaho , Noboru Murata

Estimating the causal effect of a treatment or health policy with observational data can be challenging due to an imbalance of and a lack of overlap between treated and control covariate distributions. In the presence of limited overlap,…

Methodology · Statistics 2025-03-24 Martha Barnard , Jared D. Huling , Julian Wolfson

Identification of model parameters in computer simulations is an important topic in computer experiments. We propose a new method, called the projected kernel calibration method, to estimate these model parameters. The proposed method is…

Methodology · Statistics 2017-05-10 Rui Tuo

The alignment of biological networks has the potential to teach us as much about biology and disease as has sequence alignment. Sequence alignment can be optimally solved in polynomial time. In contrast, network alignment is $NP$-hard,…

Molecular Networks · Quantitative Biology 2016-07-12 Nil Mamano , Wayne Hayes

Representational similarity metrics typically force all units to be matched, making them susceptible to noise and outliers common in neural representations. We extend the soft-matching distance to a partial optimal transport setting that…

Machine Learning · Computer Science 2026-02-24 Chaitanya Kapoor , Alex H. Williams , Meenakshi Khosla

It is now a standard for neural network representations to be trained on large, publicly available datasets, and used for new problems. The reasons for why neural network representations have been so successful for transfer, however, are…

Machine Learning · Computer Science 2022-09-20 Ehsan Imani , Wei Hu , Martha White

Generative models, like large language models, are becoming increasingly relevant in our daily lives, yet a theoretical framework to assess their generalization behavior and uncertainty does not exist. Particularly, the problem of…

Machine Learning · Computer Science 2024-07-11 Sebastian G. Gruber , Florian Buettner

Biological intelligence is remarkable in its ability to produce complex behaviour in many diverse situations through data efficient, generalisable and transferable skill acquisition. It is believed that learning "good" sensory…

Neurons and Cognition · Quantitative Biology 2022-03-18 Irina Higgins , Sébastien Racanière , Danilo Rezende

Imbalanced data occurs in a wide range of scenarios. The skewed distribution of the target variable elicits bias in machine learning algorithms. One of the popular methods to combat imbalanced data is to artificially balance the data…

Machine Learning · Computer Science 2021-10-26 Firuz Kamalov , Ashraf Elnagar

Mirror neurons are a class of neurons that activate both when an individual observes an action and when they perform the same action. This mechanism reveals a fundamental interplay between action understanding and embodied execution,…

Artificial Intelligence · Computer Science 2025-09-26 Wentao Zhu , Zhining Zhang , Yuwei Ren , Yin Huang , Hao Xu , Yizhou Wang

Kernel canonical correlation analysis (KCCA) is a nonlinear multi-view representation learning technique with broad applicability in statistics and machine learning. Although there is a closed-form solution for the KCCA objective, it…

Machine Learning · Computer Science 2016-03-01 Weiran Wang , Karen Livescu

Deep neural networks (DNNs) are known for extracting useful information from large amounts of data. However, the representations learned in DNNs are typically hard to interpret, especially in dense layers. One crucial issue of the classical…

Neural and Evolutionary Computing · Computer Science 2021-05-06 Yuyang Gao , Giorgio A. Ascoli , Liang Zhao

Recent works have shown that deep neural networks can achieve super-human performance in a wide range of image classification tasks in the medical imaging domain. However, these works have primarily focused on classification accuracy,…

Computer Vision and Pattern Recognition · Computer Science 2020-09-10 Gongbo Liang , Yu Zhang , Xiaoqin Wang , Nathan Jacobs