Related papers: Involutions on Tip-Augmented Plane Trees for Leaf …
Motivated by a recent paper of Adin, Bagno and Roichman, we present an involution on Dyck paths that preserves the rise composition and interchanges the number of returns and the position of the first double fall.
This paper investigates two involutions on binary trees. One is the mirror symmetry of binary trees which combined with the classical bijection $\varphi$ between binary trees and plane trees answers an open problem posed by Bai and Chen.…
The problem of counting plane trees with $n$ edges and an even or an odd number of leaves was studied by Eu, Liu and Yeh, in connection with an identity on coloring nets due to Stanley. This identity was also obtained by Bonin, Shapiro and…
Let $G$ be a graph and $T_1,T_2$ be two spanning trees of $G$. We say that $T_1$ can be transformed into $T_2$ via an edge flip if there exist two edges $e \in T_1$ and $f$ in $T_2$ such that $T_2= (T_1 \setminus e) \cup f$. Since spanning…
The operation of transforming one spanning tree into another by replacing an edge has been considered widely, both for general and planar straight-line graphs. For the latter, several variants have been studied (e.g., edge slides and edge…
An evolutionary tree is a rooted tree where each internal vertex has at least two children and where the leaves are labeled with distinct symbols representing species. Evolutionary trees are useful for modeling the evolutionary history of…
We classify conjugacy classes of involutions in the isometry groups of nondegenerate, symmetric bilinear forms over the field of two elements. The new component of this work focuses on the case of an orthogonal form on an even dimensional…
Plane increasing trees are rooted labeled trees embedded into the plane such that the sequence of labels is increasing on any branch starting at the root. Relaxed binary trees are a subclass of unlabeled directed acyclic graphs. We…
The purpose of this article is to show how the isotropy subgroup of leaf permutations on binary trees can be used to systematically identify tree-informative invariants relevant to models of phylogenetic evolution. In the quartet case, we…
Phylogenetic trees are binary nonplanar trees with labelled leaves, and plane oriented recursive trees are planar trees with an increasing labelling. Both families are enumerated by double factorials. A bijection is constructed, using the…
Phylogenetic mixtures model the inhomogeneous molecular evolution commonly observed in data. The performance of phylogenetic reconstruction methods where the underlying data is generated by a mixture model has stimulated considerable recent…
We prove that the spanning trees of any outerplanar triangulation $G$ can be listed so that any two consecutive spanning trees differ in an exchange of two edges that share an end vertex. For outerplanar graphs $G$ with faces of arbitrary…
A leaf of a plane tree is called an old leaf if it is the leftmost child of its parent, and it is called a young leaf otherwise. In this paper we enumerate plane trees with a given number of old leaves and young leaves. The formula is…
Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have been proposed in the literature, the subclass of binary…
This paper introduces invariant transforms that preserve the ratio of either two or three co-linear points in the Desargues affine plane skew field. The results given here have a clean, geometric presentation based based Desargues affine…
Multi-edge trees as introduced in a recent paper of Dziemia\'nczuk are plane trees where multiple edges are allowed. We first show that $d$-ary multi-edge trees where the out-degrees are bounded by $d$ are in bijection with classical…
Plane perfect matchings of $2n$ points in convex position are in bijection with triangulations of convex polygons of size $n+2$. Edge flips are a classic operation to perform local changes both structures have in common. In this work, we…
We consider random arrays indexed by the leaves of an infinitary rooted tree of finite depth, with the distribution invariant under the rearrangements that preserve the tree structure. We call such arrays hierarchically exchangeable and…
We apply the theory of markov random fields on trees to derive a phase transition in the number of samples needed in order to reconstruct phylogenies. We consider the Cavender-Farris-Neyman model of evolution on trees, where all the inner…
A flip in a plane spanning tree $T$ is the operation of removing one edge from $T$ and adding another edge such that the resulting structure is again a plane spanning tree. For trees on a set of points in convex position we study two…