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We obtain new non-asymptotic tail bounds for the height of uniformly random trees with a given degree sequence, simply generated trees and conditioned Bienaym\'e trees (the family trees of branching processes), in the process settling three…
We introduce weights on the unrooted unlabelled plane trees as follows: let $\mu$ be a probability measure on the set of nonnegative integers whose mean is no larger than $1$; then the $\mu$-weight of a plane tree $t$ is defined as $\Pi \,…
Because biological processes can make different loci have different evolutionary histories, species tree estimation requires multiple loci from across the genome. While many processes can result in discord between gene trees and species…
We observe that a standard transformation between \emph{ordinal} trees (arbitrary rooted trees with ordered children) and binary trees leads to interesting succinct binary tree representations. There are four symmetric versions of these…
Ultrametric matrices are a class of covariance matrices that arise in latent tree models. As a parameter space in a statistical model, the set of ultrametric matrices is neither convex nor a smooth manifold. Focus in the literature has…
In this paper we give a bijective proof for a relation between uni- bi- and tricellular maps of certain topological genus. While this relation can formally be obtained using Matrix-theory as a result of the Schwinger-Dyson equation, we here…
In a rooted tree, we call a vertex {\em balanced} if it is at equal distance from all its descendant leaves. We count balanced vertices in three different tree varieties. For decreasing binary trees, we can prove that the probability that a…
Recombining trinomial trees are a workhorse for modeling discrete-event systems in option pricing, logistics, and feedback control. Because each node stores a state-dependent quantity, a depth-$D$ tree naively yields $\mathcal{O}(3^{D})$…
A congruence of the weak order is simple if its quotientope is a simple polytope. We provide an alternative elementary proof of the characterization of the simple congruences in terms of forbidden up and down arcs. For this, we provide a…
Rare events have played an increasing role in molecular phylogenetics as potentially homoplasy-poor characters.In this contribution we analyze the phylogenetic information content from a combinatorial point of view by consid-ering the…
A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…
Topological phylogenetic trees can be assigned edge weights in several natural ways, highlighting different aspects of the tree. Here the rooted triple and quartet metrizations are introduced, and applied to formulate novel fast methods of…
We study the (so-called bilinear) factorization problem answered by a weak wreath product (of monads and, more specifically, of algebras over a commutative ring) in the works by Street and by Caenepeel and De Groot. A bilinear factorization…
Bicubic maps are in bijection with \beta(0,1)-trees. We introduce two new ways of decomposing \beta(0,1)-trees. Using this we define an endofunction on \beta(0,1)-trees, and thus also on bicubic maps. We show that this endofunction is in…
We study decreasing binary trees in which every vertex with two children is colored red or blue. We construct two bijections. The first, to ordered set partitions into odd-sized blocks each arranged as an alternating permutation, shows that…
We show that the Chow covectors of a linkage matching field define a bijection between certain degree vectors and lattice points, and we demonstrate how one can recover the linkage matching field from this bijection. This resolves two open…
In this short note, we first present a simple bijection between binary trees and colored ternary trees and then derive a new identity related to generalized Catalan numbers.
Recently proposed budding tree is a decision tree algorithm in which every node is part internal node and part leaf. This allows representing every decision tree in a continuous parameter space, and therefore a budding tree can be jointly…
The dual of a map is a fundamental construction on combinatorial maps, but many other combinatorial objects also possess their notion of duality. For instance, the Tamari lattice is isomorphic to its order dual, which induces an involution…
The working-set bound [Sleator and Tarjan, J. ACM, 1985] roughly states that searching for an element is fast if the element was accessed recently. Binary search trees, such as splay trees, can achieve this property in the amortized sense,…