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Poor performance of quantitative analysis in histopathological Whole Slide Images (WSI) has been a significant obstacle in clinical practice. Annotating large-scale WSIs manually is a demanding and time-consuming task, unlikely to yield the…

Computer Vision and Pattern Recognition · Computer Science 2023-08-08 Sarah Cechnicka , James Ball , Hadrien Reynaud , Callum Arthurs , Candice Roufosse , Bernhard Kainz

Mycosis fungoides (MF) is a rare, potentially life threatening skin disease, which in early stages clinically and histologically strongly resembles Eczema, a very common and benign skin condition. In order to increase the survival rate, one…

Image and Video Processing · Electrical Eng. & Systems 2020-09-14 Jérémy Scheurer , Claudio Ferrari , Luis Berenguer Todo Bom , Michaela Beer , Werner Kempf , Luis Haug

Acute Kidney Injury (AKI) is a frequent complication in critically ill patients, affecting up to 50% of patients in the intensive care units. The lack of standardized and open-source tools for applying the Kidney Disease Improving Global…

Due to the recent advancements in machine vision, digital pathology has gained significant attention. Histopathology images are distinctly rich in visual information. The tissue glass slide images are utilized for disease diagnosis.…

Image and Video Processing · Electrical Eng. & Systems 2020-11-02 Danial Maleki , Mehdi Afshari , Morteza Babaie , H. R. Tizhoosh

Kidney structures segmentation is a crucial yet challenging task in the computer-aided diagnosis of surgery-based renal cancer. Although numerous deep learning models have achieved remarkable success in many medical image segmentation…

Image and Video Processing · Electrical Eng. & Systems 2022-08-30 Shishuai Hu , Yiwen Ye , Zehui Liao , Yong Xia

Recent advances in artificial intelligence (AI), in particular self-supervised learning of foundation models (FMs), are revolutionizing medical imaging and computational pathology (CPath). A constant challenge in the analysis of digital…

Colorectal cancer (CRC) is the third most diagnosed cancer and the second leading cause of cancer-related death worldwide. Accurate histopathological grading of CRC is essential for prognosis and treatment planning but remains a subjective…

Quantification of kidney function in Dynamic Contrast-Enhanced Magnetic Resonance Imaging (DCE-MRI) requires careful segmentation of the renal region of interest (ROI). Traditionally, human experts are required to manually delineate the…

Image and Video Processing · Electrical Eng. & Systems 2019-05-27 Santosh Tirunagari , Norman Poh , Kevin Wells , Miroslaw Bober , Isky Gorden , David Windridge

Kidney function evaluation using dynamic contrast-enhanced MRI (DCE-MRI) images could help in diagnosis and treatment of kidney diseases of children. Automatic segmentation of renal parenchyma is an important step in this process. In this…

Computer Vision and Pattern Recognition · Computer Science 2017-12-20 Marzieh Haghighi , Simon K. Warfield , Sila Kurugol

There has been a long pursuit for precise and reproducible glomerular quantification on renal pathology to leverage both research and practice. When digitizing the biopsy tissue samples using whole slide imaging (WSI), a set of serial…

Computer Vision and Pattern Recognition · Computer Science 2021-03-29 Ruining Deng , Haichun Yang , Aadarsh Jha , Yuzhe Lu , Peng Chu , Agnes B. Fogo , Yuankai Huo

Deep-learning techniques have been used widely to alleviate the labour-intensive and time-consuming manual annotation required for pixel-level tissue characterization. Our previous study introduced an efficient single dynamic network -…

Image and Video Processing · Electrical Eng. & Systems 2023-05-25 Haoju Leng , Ruining Deng , Zuhayr Asad , R. Michael Womick , Haichun Yang , Lipeng Wan , Yuankai Huo

Recent advances in organoid models have revolutionized the study of human kidney disease mechanisms and drug discovery by enabling scalable, cost-effective research without the need for animal sacrifice. Here, we present a kidney organoid…

Computer Vision and Pattern Recognition · Computer Science 2025-09-16 Xiaoyu Huang , Lauren M Maxson , Trang Nguyen , Cheng Jack Song , Yuankai Huo

Changing clinical algorithms to remove race adjustment has been proposed and implemented for multiple health conditions. Removing race adjustment from estimated glomerular filtration rate (eGFR) equations may reduce disparities in chronic…

Computers and Society · Computer Science 2024-04-26 Marika M. Cusick , Glenn M. Chertow , Douglas K. Owens , Michelle Y. Williams , Sherri Rose

Clinical magnetic-resonance (MR) protocols generate many T1 and T2 sequences whose appearance differs more than the acquisition sites that produce them. Existing domain-generalization benchmarks focus almost on cross-center shifts and…

Image and Video Processing · Electrical Eng. & Systems 2025-08-01 Zheyuan Zhang , Linkai Peng , Wanying Dou , Cuiling Sun , Halil Ertugrul Aktas , Andrea M. Bejar , Elif Keles , Gorkem Durak , Ulas Bagci

Polyp segmentation, a contentious issue in medical imaging, has seen numerous proposed methods aimed at improving the quality of segmented masks. While current state-of-the-art techniques yield impressive results, the size and computational…

Image and Video Processing · Electrical Eng. & Systems 2024-04-25 Quoc-Huy Trinh , Minh-Van Nguyen , Phuoc-Thao Vo Thi

In response to the pressing challenge of kidney allocation, characterized by growing demands for organs, this research sets out to develop a data-driven solution to this problem, which also incorporates stakeholder values. The primary…

Kidney paired donation programs (KPDPs) match patients with willing but incompatible donors to compatible donors with an assurance that when they donate, their intended recipient receives a kidney in return from a different donor. A patient…

Optimization and Control · Mathematics 2023-02-13 Lizeth Carolina Riascos-Alvarez , Merve Bodur , Dionne M. Aleman

Despite the recent advances of deep learning algorithms in medical imaging, the automatic segmentation algorithms for kidneys in MRI exams are still scarce. Automated segmentation of kidneys in Magnetic Resonance Imaging (MRI) exams are…

Image and Video Processing · Electrical Eng. & Systems 2021-08-31 Manu Goyal , Junyu Guo , Lauren Hinojosa , Keith Hulsey , Ivan Pedrosa

Partial nephrectomy (PN) is common surgery in urology. Digitization of renal anatomies brings much help to many computer-aided diagnosis (CAD) techniques during PN. However, the manual delineation of kidney vascular system and tumor on each…

Image and Video Processing · Electrical Eng. & Systems 2023-05-24 Nan Ma , Ying Yang , Dongkai Zhou

Recently, deep learning has produced encouraging results for kidney stone classification using endoscope images. However, the shortage of annotated training data poses a severe problem in improving the performance and generalization ability…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Wei Zhu , Runtao Zhou , Yao Yuan , Campbell Timothy , Rajat Jain , Jiebo Luo
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