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A multispecies artificial ecosystem is formulated using cellular automata with species interactions and food chain hierarchy. The constructed finite state automaton can simulate the complexity and self-organized characteristics of the…

Cellular Automata and Lattice Gases · Physics 2010-03-30 Xin-She Yang

Despite its great success, machine learning can have its limits when dealing with insufficient training data. A potential solution is the additional integration of prior knowledge into the training process which leads to the notion of…

Most of previous work in knowledge base (KB) completion has focused on the problem of relation extraction. In this work, we focus on the task of inferring missing entity type instances in a KB, a fundamental task for KB competition yet…

Computation and Language · Computer Science 2015-04-28 Arvind Neelakantan , Ming-Wei Chang

How is quality control organized in the new "Mode 2" of the production of scientific knowledge? When institutional boundaries are increasingly blurred in a Triple Helix of University-Industry-Government relations, criteria for quality…

Computers and Society · Computer Science 2010-01-11 Yuko Fujigaki , Loet Leydesdorff

Self-organization -- a characteristic of complex adaptive systems (CAS) -- has been explored in organizational research, in management theory [Mihm et al. 2003; von Foerster 1984], firm internationalization [Chandra and Wilkinson 2017],…

Multiagent Systems · Computer Science 2020-07-20 Ananya Sheth , Joseph V. Sinfield

This paper presents an empirical study of a multi-model zero-shot pipeline for knowledge graph construction and exploitation, executed entirely through local inference on consumer-grade hardware. We propose a reproducible evaluation…

Artificial Intelligence · Computer Science 2026-04-14 Pierre Jourlin

We introduce a natural language interface for building stochastic pi calculus models of biological systems. In this language, complex constructs describing biochemical events are built from basic primitives of association, dissociation and…

Programming Languages · Computer Science 2009-11-13 Ozan Kahramanoğullari , Luca Cardelli , Emmanuelle Caron

Federated learning enables multiple distributed devices to collaboratively learn a shared prediction model without centralizing their on-device data. Most of the current algorithms require comparable individual efforts for local training…

Machine Learning · Computer Science 2022-04-07 Lan Zhang , Dapeng Wu , Xiaoyong Yuan

The Free-Energy-Principle (FEP) is an influential and controversial theory which postulates a deep and powerful connection between the stochastic thermodynamics of self-organization and learning through variational inference. Specifically,…

Artificial Intelligence · Computer Science 2021-10-05 Beren Millidge , Anil Seth , Christopher L Buckley

Modeling a structured, dynamic environment like a video game requires keeping track of the objects and their states declarative knowledge) as well as predicting how objects behave (procedural knowledge). Black-box models with a monolithic…

Despite being optimized, the information processing of biological organisms exhibits significant variability in its complexity and capability. One potential source of this diversity is the limitation of resources required for information…

Biological Physics · Physics 2025-10-21 Takehiro Tottori , Tetsuya J. Kobayashi

This article represents one of the contemporary trends in the application of the latest methods of classification in business, where intense competition and the desire to expand drive this science to far-reaching prospects using the…

Computers and Society · Computer Science 2018-02-13 Ismail Kayali

Economists model knowledge use and acquisition as a cause-and-effect calculus associating observations made by a decision-maker about their world with possible underlying causes. Knowledge models are well-established for static contexts,…

Neural and Evolutionary Computing · Computer Science 2024-12-03 Abigail Devereaux , Roger Koppl

Bioprocess mechanistic modeling is essential for advancing intelligent digital twin representation of biomanufacturing, yet challenges persist due to complex intracellular regulation, stochastic system behavior, and limited experimental…

Machine Learning · Statistics 2025-05-07 Keilung Choy , Wei Xie , Keqi Wang

Concept-based methods have emerged as a promising direction to develop interpretable neural networks in standard supervised settings. However, most works that study them in incremental settings assume either a static concept set across all…

Machine Learning · Computer Science 2025-02-28 Susmit Agrawal , Deepika Vemuri , Sri Siddarth Chakaravarthy P , Vineeth N. Balasubramanian

A universal feature of the biochemistry of any living system is that all the molecules and catalysts that are required for reactions of the system can be built up from an available food source by repeated application of reactions from…

Molecular Networks · Quantitative Biology 2013-07-11 Wim Hordijk , Peter R. Wills , Mike Steel

Large Language Models (LLMs) have achieved considerable performance across various agentic planning tasks. However, traditional agent planning approaches adopt a "flood irrigation" methodology that indiscriminately injects gold…

Computation and Language · Computer Science 2025-05-30 Shuofei Qiao , Zhisong Qiu , Baochang Ren , Xiaobin Wang , Xiangyuan Ru , Ningyu Zhang , Xiang Chen , Yong Jiang , Pengjun Xie , Fei Huang , Huajun Chen

The concept of (auto)catalytic systems has become a cornerstone in understanding evolutionary processes in various fields. The common ground is the observation that for the production of new species/goods/ideas/elements etc. the…

Populations and Evolution · Quantitative Biology 2009-11-13 Rudolf Hanel , Peter Klimek , Stefan Thurner

Concept Bottleneck Models (CBMs) offer interpretable alternatives to black-box predictors by introducing human-relatable concepts before the final output. However, existing CBMs struggle to verify whether predicted concepts correspond to…

Machine Learning · Computer Science 2026-05-15 Yingying Fang , Haijie Xu , Shuang Wu , Mariathasan Anish , Guang Yang

We develop a formal model of the emergence of self-constructing objects (e.g. heteropolymers with autocatalytic capability) in an open system, which don't contain such objects initially. The objects are constructed from subunits (e.g.…

Statistical Mechanics · Physics 2025-01-06 P. O. Mchedlov-Petrosyan , L. N. Davydov