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Molecular machine learning has gained popularity with the advancements of geometric deep learning. In parallel, retrieval-augmented generation has become a principled approach commonly used with language models. However, the optimal…

Machine Learning · Computer Science 2025-07-04 Runzhong Wang , Rui-Xi Wang , Mrunali Manjrekar , Connor W. Coley

As a fundamental problem in pattern recognition, graph matching has applications in a variety of fields, from computer vision to computational biology. In graph matching, patterns are modeled as graphs and pattern recognition amounts to…

Computer Vision and Pattern Recognition · Computer Science 2008-06-19 Tiberio S. Caetano , Julian J. McAuley , Li Cheng , Quoc V. Le , Alex J. Smola

This article presents a model which is capable of learning and abstracting new concepts based on comparing observations and finding the resemblance between the observations. In the model, the new observations are compared with the templates…

Machine Learning · Computer Science 2011-01-27 Mohammadreza Abolghasemi-Dahaghani , Farzad Didehvar , Alireza Nowroozi

We present a novel framework for machine translation evaluation using neural networks in a pairwise setting, where the goal is to select the better translation from a pair of hypotheses, given the reference translation. In this framework,…

Computation and Language · Computer Science 2019-12-09 Francisco Guzman , Shafiq Joty , Lluis Marquez , Preslav Nakov

Deep metric learning (DML) has received much attention in deep learning due to its wide applications in computer vision. Previous studies have focused on designing complicated losses and hard example mining methods, which are mostly…

Machine Learning · Computer Science 2020-06-19 Qi Qi , Yan Yan , Xiaoyu Wang , Tianbao Yang

Image matching, which establishes correspondences between two-view images to recover 3D structure and camera geometry, serves as a cornerstone in computer vision and underpins a wide range of applications, including visual localization, 3D…

Computer Vision and Pattern Recognition · Computer Science 2025-06-06 Shihua Zhang , Zizhuo Li , Kaining Zhang , Yifan Lu , Yuxin Deng , Linfeng Tang , Xingyu Jiang , Jiayi Ma

We develop a learning framework for building deformable templates, which play a fundamental role in many image analysis and computational anatomy tasks. Conventional methods for template creation and image alignment to the template have…

Computer Vision and Pattern Recognition · Computer Science 2019-10-14 Adrian V. Dalca , Marianne Rakic , John Guttag , Mert R. Sabuncu

Deep Metric Learning (DML), a widely-used technique, involves learning a distance metric between pairs of samples. DML uses deep neural architectures to learn semantic embeddings of the input, where the distance between similar examples is…

Machine Learning · Computer Science 2021-02-16 Thomas Kobber Panum , Zi Wang , Pengyu Kan , Earlence Fernandes , Somesh Jha

We study pattern matching problems on two major representations of uncertain sequences used in molecular biology: weighted sequences (also known as position weight matrices, PWM) and profiles (i.e., scoring matrices). In the simple version,…

Data Structures and Algorithms · Computer Science 2016-07-12 Tomasz Kociumaka , Solon P. Pissis , Jakub Radoszewski

Although the recent progress in the deep neural network has led to the development of learnable local feature descriptors, there is no explicit answer for estimation of the necessary size of a neural network. Specifically, the local feature…

Machine Learning · Computer Science 2017-06-19 Chong Huang , Qiong Liu , Yan-Ying Chen , Kwang-Ting , Cheng

Latent representations learned by neural networks often exhibit semantic structure, where concept similarity is reflected by geometric proximity in embedding space. However, comparing such spaces across models remains difficult: changes in…

Learning a similarity metric has gained much attention recently, where the goal is to learn a function that maps input patterns to a target space while preserving the semantic distance in the input space. While most related work focused on…

Computer Vision and Pattern Recognition · Computer Science 2019-05-03 Guixiang Ma , Nesreen K. Ahmed , Ted Willke , Dipanjan Sengupta , Michael W. Cole , Nicholas B. Turk-Browne , Philip S. Yu

Manifold learning is a popular and quickly-growing subfield of machine learning based on the assumption that one's observed data lie on a low-dimensional manifold embedded in a higher-dimensional space. This thesis presents a mathematical…

Machine Learning · Computer Science 2020-11-04 Luke Melas-Kyriazi

We propose a new algorithm to learn a one-hidden-layer convolutional neural network where both the convolutional weights and the outputs weights are parameters to be learned. Our algorithm works for a general class of (potentially…

Machine Learning · Computer Science 2018-06-05 Simon S. Du , Surbhi Goel

We give a new algorithm for learning a two-layer neural network under a general class of input distributions. Assuming there is a ground-truth two-layer network $$ y = A \sigma(Wx) + \xi, $$ where $A,W$ are weight matrices, $\xi$ represents…

Machine Learning · Computer Science 2019-02-05 Rong Ge , Rohith Kuditipudi , Zhize Li , Xiang Wang

EM algorithm is a convenient tool for maximum likelihood model fitting when the data are incomplete or when there are latent variables or hidden states. In this review article we explain that EM algorithm is a natural computational scheme…

Methodology · Statistics 2011-04-13 Zhangzhang Si , Haifeng Gong , Song-Chun Zhu , Ying Nian Wu

We develop information-geometric techniques to analyze the trajectories of the predictions of deep networks during training. By examining the underlying high-dimensional probabilistic models, we reveal that the training process explores an…

In this paper we present a tracker, which is radically different from state-of-the-art trackers: we apply no model updating, no occlusion detection, no combination of trackers, no geometric matching, and still deliver state-of-the-art…

Computer Vision and Pattern Recognition · Computer Science 2016-05-20 Ran Tao , Efstratios Gavves , Arnold W. M. Smeulders

We propose a method of aligning a source image to a target image, where the transform is specified by a dense vector field. The two images are encoded as feature hierarchies by siamese convolutional nets. Then a hierarchy of aligner modules…

Computer Vision and Pattern Recognition · Computer Science 2019-04-05 Eric Mitchell , Stefan Keselj , Sergiy Popovych , Davit Buniatyan , H. Sebastian Seung

Group theory has been used in machine learning to provide a theoretically grounded approach for incorporating known symmetry transformations in tasks from robotics to protein modeling. In these applications, equivariant neural networks use…

Machine Learning · Computer Science 2025-01-17 Lucas Laird , Circe Hsu , Asilata Bapat , Robin Walters