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Histopathology Whole Slide Image (WSI) analysis serves as the gold standard for clinical cancer diagnosis in the daily routines of doctors. To develop computer-aided diagnosis model for WSIs, previous methods typically employ Multi-Instance…

Computer Vision and Pattern Recognition · Computer Science 2024-10-21 Honglin Li , Yunlong Zhang , Pingyi Chen , Zhongyi Shui , Chenglu Zhu , Lin Yang

Presenting whole slide images (WSIs) as graph will enable a more efficient and accurate learning framework for cancer diagnosis. Due to the fact that a single WSI consists of billions of pixels and there is a lack of vast annotated datasets…

Image and Video Processing · Electrical Eng. & Systems 2023-06-09 Milan Aryal , Nasim Yahyasoltani

In digital pathology, Whole Slide Image (WSI) analysis is usually formulated as a Multiple Instance Learning (MIL) problem. Although transformer-based architectures have been used for WSI classification, these methods require modifications…

Computer Vision and Pattern Recognition · Computer Science 2023-10-03 Juan I. Pisula , Katarzyna Bozek

Self-attention model have shown its flexibility in parallel computation and the effectiveness on modeling both long- and short-term dependencies. However, it calculates the dependencies between representations without considering the…

Computation and Language · Computer Science 2019-02-18 Baosong Yang , Jian Li , Derek Wong , Lidia S. Chao , Xing Wang , Zhaopeng Tu

Recently there have been many algorithms proposed for the classification of very high resolution whole slide images (WSIs). These new algorithms are mostly focused on finding novel ways to combine the information from small local patches…

Computer Vision and Pattern Recognition · Computer Science 2023-10-06 Long Nguyen , Aiden Nibali , Joshua Millward , Zhen He

Whole slide image (WSI) classification has emerged as a powerful tool in computational pathology, but remains constrained by domain shifts, e.g., due to different organs, diseases, or institution-specific variations. To address this…

Computer Vision and Pattern Recognition · Computer Science 2025-05-14 Pratibha Kumari , Daniel Reisenbüchler , Afshin Bozorgpour , Nadine S. Schaadt , Friedrich Feuerhake , Dorit Merhof

Histopathology image analysis is the golden standard of clinical diagnosis for Cancers. In doctors daily routine and computer-aided diagnosis, the Whole Slide Image (WSI) of histopathology tissue is used for analysis. Because of the…

Computer Vision and Pattern Recognition · Computer Science 2023-11-23 Honglin Li , Yunlong Zhang , Chenglu Zhu , Jiatong Cai , Sunyi Zheng , Lin Yang

Single Image Super-Resolution (SISR) reconstructs high-resolution images from low-resolution inputs, enhancing image details. While Vision Transformer (ViT)-based models improve SISR by capturing long-range dependencies, they suffer from…

Computer Vision and Pattern Recognition · Computer Science 2025-04-10 Junyoung Kim , Youngrok Kim , Siyeol Jung , Donghyun Min

Self-attention is a useful mechanism to build generative models for language and images. It determines the importance of context elements by comparing each element to the current time step. In this paper, we show that a very lightweight…

Computation and Language · Computer Science 2019-02-26 Felix Wu , Angela Fan , Alexei Baevski , Yann N. Dauphin , Michael Auli

We argue that neither transformers nor sub-quadratic architectures are well suited to training at long sequence lengths: the cost of processing the context is too expensive in the former, too inexpensive in the latter. Approaches such as…

Machine Learning · Computer Science 2025-07-08 Carles Gelada , Jacob Buckman , Sean Zhang , Txus Bach

As the demand for long-context large language models (LLMs) increases, models with context windows of up to 128K or 1M tokens are becoming increasingly prevalent. However, long-context LLM inference is challenging since the inference speed…

Computation and Language · Computer Science 2024-08-28 Jiaming Tang , Yilong Zhao , Kan Zhu , Guangxuan Xiao , Baris Kasikci , Song Han

Biomedical imaging modalities often produce high-resolution, multi-dimensional images that pose computational challenges for deep neural networks. These computational challenges are compounded when training transformers due to the…

Computer Vision and Pattern Recognition · Computer Science 2025-01-03 Sarah M. Hooper , Hui Xue

Vision Transformers have shown great promise recently for many vision tasks due to the insightful architecture design and attention mechanism. By revisiting the self-attention responses in Transformers, we empirically observe two…

Computer Vision and Pattern Recognition · Computer Science 2022-12-27 Xu Ma , Huan Wang , Can Qin , Kunpeng Li , Xingchen Zhao , Jie Fu , Yun Fu

Deep learning methods such as convolutional neural networks (CNNs) are difficult to directly utilize to analyze whole slide images (WSIs) due to the large image dimensions. We overcome this limitation by proposing a novel two-stage…

Image and Video Processing · Electrical Eng. & Systems 2021-06-15 Shivam Kalra , Mohammed Adnan , Sobhan Hemati , Taher Dehkharghanian , Shahryar Rahnamayan , Hamid Tizhoosh

The self-attention mechanism has attracted wide publicity for its most important advantage of modeling long dependency, and its variations in computer vision tasks, the non-local block tries to model the global dependency of the input…

Computer Vision and Pattern Recognition · Computer Science 2021-06-10 Sheng Fang , Kaiyu Li , Zhe Li

Since context modeling is critical for estimating depth from a single image, researchers put tremendous effort into obtaining global context. Many global manipulations are designed for traditional CNN-based architectures to overcome the…

Computer Vision and Pattern Recognition · Computer Science 2022-05-02 Chang Shu , Ziming Chen , Lei Chen , Kuan Ma , Minghui Wang , Haibing Ren

This paper presents a novel keypoints-based attention mechanism for visual recognition in still images. Deep Convolutional Neural Networks (CNNs) for recognizing images with distinctive classes have shown great success, but their…

Computer Vision and Pattern Recognition · Computer Science 2021-10-26 Asish Bera , Zachary Wharton , Yonghuai Liu , Nik Bessis , Ardhendu Behera

Traditional whole slide image (WSI) analysis methods typically rely on the multiple instance learning (MIL) paradigm, which extracts patch-level features at high magnification and aggregates them for slide-level prediction. However, such…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Jiusong Ge , Yingkang Zhan , Wenjie Zhao , Di Zhang , Ke Wang , Jiashuai Liu , Chunze Yang , Chengzu Li , Jian Zhang , Yuxin Dong , Ni Zhang , Qidong Liu , Mireia Crispin-Ortuzar , Huazhu Fu , Chen Li , Zeyu Gao

Vision Transformers (ViT) serve as powerful vision models. Unlike convolutional neural networks, which dominated vision research in previous years, vision transformers enjoy the ability to capture long-range dependencies in the data.…

Computer Vision and Pattern Recognition · Computer Science 2022-04-20 Moab Arar , Ariel Shamir , Amit H. Bermano

Long-context understanding is crucial for many NLP applications, yet transformers struggle with efficiency due to the quadratic complexity of self-attention. Sparse attention methods alleviate this cost but often impose static, predefined…

Computation and Language · Computer Science 2025-06-16 Hanzhi Zhang , Heng Fan , Kewei Sha , Yan Huang , Yunhe Feng
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