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In this paper, a nonlinear symbolic regression technique using an evolutionary algorithm known as multi-gene genetic programming (MGGP) is applied for a data-driven modelling between the dependent and the independent variables. The…

Neural and Evolutionary Computing · Computer Science 2014-03-05 Indranil Pan , Daya Shankar Pandey , Saptarshi Das

One common belief is that with complex models and pre-training on large-scale datasets, transformer-based methods for referring expression comprehension (REC) perform much better than existing graph-based methods. We observe that since most…

Computer Vision and Pattern Recognition · Computer Science 2024-09-06 Jingcheng Ke , Dele Wang , Jun-Cheng Chen , I-Hong Jhuo , Chia-Wen Lin , Yen-Yu Lin

The study of evolution of networks has received increased interest with the recent discovery that many real-world networks possess many things in common, in particular the manner of evolution of such networks. By adding a dimension of time…

Combinatorics · Mathematics 2010-06-24 Anurat Chapanond , Mukkai S. Krishnamoorthy , G. M. Prabhu , J. Punin

Many machine learning strategies designed to automate mathematical tasks leverage neural networks to search large combinatorial spaces of mathematical symbols. In contrast to traditional evolutionary approaches, using a neural network at…

Evolutionary algorithms (EAs) simulate natural selection but have two main limitations: (1) they rarely update individuals based on global correlations, limiting comprehensive learning; (2) they struggle with balancing exploration and…

Neural and Evolutionary Computing · Computer Science 2025-11-25 Kaichen Ouyang , Zong Ke , Shengwei Fu , Lingjie Liu , Puning Zhao , Dayu Hu

Graph representation learning (GRL) is to encode graph elements into informative vector representations, which can be used in downstream tasks for analyzing graph-structured data and has seen extensive applications in various domains.…

Machine Learning · Computer Science 2024-06-21 Hewen Wang , Renchi Yang , Xiaokui Xiao

Graph neural networks (GNN) have shown great advantages in many graph-based learning tasks but often fail to predict accurately for a task-based on sets of nodes such as link/motif prediction and so on. Many works have recently proposed to…

Machine Learning · Computer Science 2022-06-24 Haorui Wang , Haoteng Yin , Muhan Zhang , Pan Li

Genetic Programming (GP) has been primarily used to tackle optimization, classification, and feature selection related tasks. The widespread use of GP is due to its flexible and comprehensible tree-type structure. Similarly, research is…

Computer Vision and Pattern Recognition · Computer Science 2020-06-29 Asifullah Khan , Aqsa Saeed Qureshi , Noorul Wahab , Mutawara Hussain , Muhammad Yousaf Hamza

Grammatical Evolution (GE) is one of the most popular Genetic Programming (GP) variants, and it has been used with success in several problem domains. Since the original proposal, many enhancements have been proposed to GE in order to…

Neural and Evolutionary Computing · Computer Science 2021-03-16 Jessica Mégane , Nuno Lourenço , Penousal Machado

Genetic Gaussian network of multiple phenotypes constructed through the genetic correlation matrix is informative for understanding their biological dependencies. However, its interpretation may be challenging because the estimated genetic…

Methodology · Statistics 2024-12-31 Yihe Yang , Noah Lorincz-Comi , Xiaofeng Zhu

Vectorial Genetic Programming (Vec-GP) extends GP by allowing vectors as input features along regular, scalar features, using them by applying arithmetic operations component-wise or aggregating vectors into scalars by some aggregation…

Neural and Evolutionary Computing · Computer Science 2023-03-07 Philipp Fleck , Stephan Winkler , Michael Kommenda , Michael Affenzeller

We propose an approach to symbolic regression based on a novel variational autoencoder for generating hierarchical structures, HVAE. It combines simple atomic units with shared weights to recursively encode and decode the individual nodes…

Machine Learning · Computer Science 2023-09-12 Sebastian Mežnar , Sašo Džeroski , Ljupčo Todorovski

We study the challenges of applying deep learning to gene expression data. We find experimentally that there exists non-linear signal in the data, however is it not discovered automatically given the noise and low numbers of samples used in…

Genomics · Quantitative Biology 2018-06-20 Francis Dutil , Joseph Paul Cohen , Martin Weiss , Georgy Derevyanko , Yoshua Bengio

Cartesian Genetic Programming has traditionally been using mutation as its main and often sole genetic operator to drive evolutionary search. Despite advancements in recent years, recombinationbased approaches have long been avoided, due to…

Neural and Evolutionary Computing · Computer Science 2026-05-28 Duy Long Tran , Anja Jankovic , Marie Anastacio , Holger Hoos , Roman Kalkreuth

By combining Genetic Programming, MAP-Elites and Covariance Matrix Adaptation Evolution Strategy, we demonstrate very high success rates in Symbolic Regression problems. MAP-Elites is used to improve exploration while preserving diversity…

Neural and Evolutionary Computing · Computer Science 2019-06-11 J. -P. Bruneton , L. Cazenille , A. Douin , V. Reverdy

We present SignalGP, a new genetic programming (GP) technique designed to incorporate the event-driven programming paradigm into computational evolution's toolbox. Event-driven programming is a software design philosophy that simplifies the…

Neural and Evolutionary Computing · Computer Science 2018-04-17 Alexander Lalejini , Charles Ofria

Data-driven methods are widely used to develop physical models, but there still exist limitations that affect their performance, generalizability and robustness. By combining gene expression programming (GEP) with artificial neural network…

Computational Physics · Physics 2023-01-19 Haochen Li , Fabian Waschkowski , Yaomin Zhao , Richard D. Sandberg

Molecular interactions often involve high-order relationships that cannot be fully captured by traditional graph-based models limited to pairwise connections. Hypergraphs naturally extend graphs by enabling multi-way interactions, making…

Machine Learning · Computer Science 2025-05-12 Tien Dang , Truong-Son Hy

Many promising approaches to symbolic regression have been presented in recent years, yet progress in the field continues to suffer from a lack of uniform, robust, and transparent benchmarking standards. In this paper, we address this…

Neural and Evolutionary Computing · Computer Science 2021-08-02 William La Cava , Patryk Orzechowski , Bogdan Burlacu , Fabrício Olivetti de França , Marco Virgolin , Ying Jin , Michael Kommenda , Jason H. Moore

Genetic programming has been widely used in the engineering field. Compared with the conventional genetic programming and artificial neural network, geometric semantic genetic programming (GSGP) is superior in astringency and computing…

Neural and Evolutionary Computing · Computer Science 2017-12-06 Juncai Xu , Zhenzhong Shen , Qingwen Ren , Xin Xie , Zhengyu Yang