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Self-supervised training methods for transformers have demonstrated remarkable performance across various domains. Previous transformer-based models, such as masked autoencoders (MAE), typically utilize a single normalization layer for both…

Computation and Language · Computer Science 2023-11-30 Xiaohui Chen , Yinkai Wang , Yuanqi Du , Soha Hassoun , Li-Ping Liu

Various normalization layers have been proposed to help the training of neural networks. Group Normalization (GN) is one of the effective and attractive studies that achieved significant performances in the visual recognition task. Despite…

Computer Vision and Pattern Recognition · Computer Science 2022-07-06 Agus Gunawan , Xu Yin , Kang Zhang

Prostate cancer is among the most common cancer in males and its heterogeneity is well known. Its early detection helps making therapeutic decision. There is no standard technique or procedure yet which is full-proof in predicting cancer…

Machine Learning · Computer Science 2018-12-18 Khalid Raza , Atif N Hasan

Pretraining DNA language models (DNALMs) on the full human genome is resource-intensive, yet often considered necessary for strong downstream performance. Inspired by recent findings in NLP and long-context modeling, we explore an…

Genomics · Quantitative Biology 2025-06-24 Sohan Mupparapu , Parameswari Krishnamurthy , Ratish Puduppully

Normalization is an important and vastly investigated technique in deep learning. However, its role for Ordinary Differential Equation based networks (neural ODEs) is still poorly understood. This paper investigates how different…

Machine Learning · Computer Science 2020-04-29 Julia Gusak , Larisa Markeeva , Talgat Daulbaev , Alexandr Katrutsa , Andrzej Cichocki , Ivan Oseledets

Deep neural networks (DNNs) have set benchmarks on a wide array of supervised learning tasks. Trained DNNs, however, often lack robustness to minor adversarial perturbations to the input, which undermines their true practicality. Recent…

Machine Learning · Computer Science 2018-11-20 Farzan Farnia , Jesse M. Zhang , David Tse

Named entity recognition (NER) for identifying proper nouns in unstructured text is one of the most important and fundamental tasks in natural language processing. However, despite the widespread use of NER models, they still require a…

Computation and Language · Computer Science 2020-12-23 Zhifeng Hao , Di Lv , Zijian Li , Ruichu Cai , Wen Wen , Boyan Xu

Regularization is a fundamental technique to prevent over-fitting and to improve generalization performances by constraining a model's complexity. Current Deep Networks heavily rely on regularizers such as Data-Augmentation (DA) or…

Machine Learning · Computer Science 2022-04-12 Randall Balestriero , Leon Bottou , Yann LeCun

Random ordinary differential equations (RODEs), i.e. ODEs with random parameters, are often used to model complex dynamics. Most existing methods to identify unknown governing RODEs from observed data often rely on strong prior knowledge.…

Numerical Analysis · Mathematics 2020-06-04 Junyu Liu , Zichao Long , Ranran Wang , Jie Sun , Bin Dong

The normalizing layer has become one of the basic configurations of deep learning models, but it still suffers from computational inefficiency, interpretability difficulties, and low generality. After gaining a deeper understanding of the…

Machine Learning · Computer Science 2022-10-14 Chang Liu , Yuwen Yang , Yue Ding , Hongtao Lu

Dynamic Contrast Enhanced-Magnetic Resonance Imaging (DCE-MRI) is widely used to complement ultrasound examinations and x-ray mammography during the early detection and diagnosis of breast cancer. However, images generated by various MRI…

Image and Video Processing · Electrical Eng. & Systems 2021-06-18 Gourav Modanwal , Adithya Vellal , Maciej A. Mazurowski

Neural networks are promising tools for high-throughput and accurate transmission electron microscopy (TEM) analysis of nanomaterials, but are known to generalize poorly on data that is "out-of-distribution" from their training data. Given…

Materials Science · Physics 2023-06-22 Katherine Sytwu , Luis Rangel DaCosta , Mary C. Scott

Electroencephalography (EEG) denoising methods typically depend on manual intervention or clean reference signals. This work introduces a task-oriented learning framework for automatic EEG denoising that uses only task labels without clean…

Signal Processing · Electrical Eng. & Systems 2026-03-12 Tian-Yu Xiang , Zheng Lei , Xiao-Hu Zhou , Xiao-Liang Xie , Shi-Qi Liu , Mei-Jiang Gui , Hong-Yun Ou , Xin-Zheng Huang , Xin-Yi Fu , Zeng-Guang Hou

Neuro-encoded expression programming(NEEP) that aims to offer a novel continuous representation of combinatorial encoding for genetic programming methods is proposed in this paper. Genetic programming with linear representation uses…

Neural and Evolutionary Computing · Computer Science 2021-04-12 Aftab Anjum , Fengyang Sun , Lin Wang , Jeff Orchard

Batch normalization is currently the most widely used variant of internal normalization for deep neural networks. Additional work has shown that the normalization of weights and additional conditioning as well as the normalization of…

Computer Vision and Pattern Recognition · Computer Science 2021-01-19 Wolfgang Fuhl , Enkelejda Kasneci

Training Deep Convolutional Neural Networks (CNNs) is based on the notion of using multiple kernels and non-linearities in their subsequent activations to extract useful features. The kernels are used as general feature extractors without…

Computer Vision and Pattern Recognition · Computer Science 2020-11-13 Alexandros Stergiou , Ronald Poppe , Remco C. Veltkamp

The application of machine learning to transcriptomics data has led to significant advances in cancer research. However, the high dimensionality and complexity of RNA sequencing (RNA-seq) data pose significant challenges in pan-cancer…

Genomics · Quantitative Biology 2024-08-15 Jong Hyun Kim , Jongseong Jang

Four reasons why you might wish to read this paper: 1. We have devised a new statistical T test to determine differentially expressed genes (DEG) in the context of microarray experiments. This statistical test adds a new member to the…

Quantitative Methods · Quantitative Biology 2007-05-23 Shu-Dong Zhang , Timothy W. Gant

Transductive few-shot learning has recently triggered wide attention in computer vision. Yet, current methods introduce key hyper-parameters, which control the prediction statistics of the test batches, such as the level of class balance,…

Computer Vision and Pattern Recognition · Computer Science 2025-04-14 Long Zhou , Fereshteh Shakeri , Aymen Sadraoui , Mounir Kaaniche , Jean-Christophe Pesquet , Ismail Ben Ayed

2D biomedical semantic segmentation is important for robotic vision in surgery. Segmentation methods based on Deep Convolutional Neural Network (DCNN) can out-perform conventional methods in terms of both accuracy and levels of automation.…

Computer Vision and Pattern Recognition · Computer Science 2019-01-15 Xiao-Yun Zhou , Guang-Zhong Yang