English
Related papers

Related papers: SPM 25: open source neuroimaging analysis software

200 papers

Safe policy improvement (SPI) is an offline reinforcement learning problem in which a new policy that reliably outperforms the behavior policy with high confidence needs to be computed using only a dataset and the behavior policy. Markov…

Artificial Intelligence · Computer Science 2025-08-20 Kasper Engelen , Guillermo A. Pérez , Marnix Suilen

Although Raman spectroscopy is widely used for the investigation of biomedical samples and has a high potential for use in clinical applications, it is not common in clinical routines. One of the factors that obstruct the integration of…

Data Analysis, Statistics and Probability · Physics 2022-01-20 Darina Storozhuk , Oleg Ryabchykov , Juergen Popp , Thomas Bocklitz

Current psychiatric research is in crisis. In this review I will describe the causes of this crisis and highlight recent efforts to overcome current challenges. One particularly promising approach is the emerging field of computational…

Neurons and Cognition · Quantitative Biology 2013-03-25 Thomas V. Wiecki

Context: software projects are common resources in Software Engineering experiments, although these are often selected without following a specific strategy, which reduces the representativeness and replication of the results. An option is…

Software Engineering · Computer Science 2021-09-17 Juan Andres Carruthers , Jorge Andres Diaz Pace , Emanuel Agustin Irrazabal

Spatio-temporal point processes (STPPs) are potent mathematical tools for modeling and predicting events with both temporal and spatial features. Despite their versatility, most existing methods for learning STPPs either assume a restricted…

Machine Learning · Computer Science 2023-10-26 Zichong Li , Qunzhi Xu , Zhenghao Xu , Yajun Mei , Tuo Zhao , Hongyuan Zha

Simulated data is increasingly valued by researchers for validating MRS processing and analysis algorithms. However, there is no consensus on the optimal approaches for simulation models and parameters. This study introduces a novel MRS…

In current microarchitectures, due to the complex memory hierarchies and different latencies on memory accesses, thread and data mapping are important issues to improve application performance. Software transactional memory (STM) is an…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-24 Douglas Pereira Pasqualin , Matthias Diener , André Rauber Du Bois , Maurício Lima Pilla

In many safety-critical engineering domains, hazard analysis techniques are an essential part of requirement elicitation. Of the methods proposed for this task, STPA (System-Theoretic Process Analysis) represents a relatively recent…

Software Engineering · Computer Science 2025-03-18 Ali Raeisdanaei , Juho Kim , Michael Liao , Sparsh Kochhar

State space models (SSMs) are a powerful and widely-used class of probabilistic models for analysing time-series data across various fields, from econometrics to robotics. Despite their prevalence, existing software frameworks for SSMs…

Computation · Statistics 2025-05-30 Tim Hargreaves , Qing Li , Charles Knipp , Frederic Wantiez , Simon J. Godsill , Hong Ge

XSLT is an increasingly popular language for processing XML data. It is widely supported by application platform software. However, little optimization effort has been made inside the current XSLT processing engines. Evaluating a very…

Databases · Computer Science 2007-05-23 Zhimao Guo , Min Li , Xiaoling Wang , Aoying Zhou

Sparse systems are usually parameterized by a tuning parameter that determines the sparsity of the system. How to choose the right tuning parameter is a fundamental and difficult problem in learning the sparse system. In this paper, by…

Methodology · Statistics 2019-01-18 Moo K. Chung , Jamie L. Hanson , Jieping Ye , Richard J. Davidson , Seth D. Pollak

Spatial Transcriptomics (ST) enables the measurement of gene expression while preserving spatial information, offering critical insights into tissue architecture and disease pathology. Recent developments have explored the use of…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Hai Dang Nguyen , Nguyen Dang Huy Pham , The Minh Duc Nguyen , Dac Thai Nguyen , Hang Thi Nguyen , Duong M. Nguyen

Recently, state space models (SSM), particularly Mamba, have attracted significant attention from scholars due to their ability to effectively balance computational efficiency and performance. However, most existing visual Mamba methods…

Computer Vision and Pattern Recognition · Computer Science 2025-04-09 Leiye Liu , Miao Zhang , Jihao Yin , Tingwei Liu , Wei Ji , Yongri Piao , Huchuan Lu

In this paper we will focus on the potential and on the challenges associated with the development of an integrated brain and spinal cord modelling framework for processing MR neuroimaging data. The aim of the work is to explore how a…

Computer Vision and Pattern Recognition · Computer Science 2017-07-06 Claudia Blaiotta , Patrick Freund , M. Jorge Cardoso , John Ashburner

Anatomy evaluation is crucial for understanding the physiological state, diagnosing abnormalities, and guiding medical interventions. Statistical shape modeling (SSM) is vital in this process. By enabling the extraction of quantitative…

Computer Vision and Pattern Recognition · Computer Science 2025-02-12 Krithika Iyer , Mokshagna Sai Teja Karanam , Shireen Elhabian

State-space models (SSMs) are a highly expressive model class for learning patterns in time series data and for system identification. Deterministic versions of SSMs (e.g. LSTMs) proved extremely successful in modeling complex time series…

Existing language models (LMs) predict tokens with a softmax over a finite vocabulary, which can make it difficult to predict rare tokens or phrases. We introduce NPM, the first nonparametric masked language model that replaces this softmax…

Computation and Language · Computer Science 2023-05-29 Sewon Min , Weijia Shi , Mike Lewis , Xilun Chen , Wen-tau Yih , Hannaneh Hajishirzi , Luke Zettlemoyer

The Statistical Toolkit is an open source system specialized in the statistical comparison of distributions. It addresses requirements common to different experimental domains, such as simulation validation (e.g. comparison of experimental…

Computational Physics · Physics 2015-06-11 M Batic , A. M. Paganoni , A. Pfeiffer , M. G. Pia , A. Ribon

Motion planning is a critical component in any robotic system. Over the years, powerful tools like the Open Motion Planning Library (OMPL) have been developed, offering numerous motion planning algorithms. However, existing frameworks often…

Robotics · Computer Science 2025-10-01 Itamar Mishani , Yorai Shaoul , Ramkumar Natarajan , Jiaoyang Li , Maxim Likhachev

Foundation models (FMs), large neural networks pretrained on extensive and diverse datasets, have revolutionized artificial intelligence and shown significant promise in medical imaging by enabling robust performance with limited labeled…

Image and Video Processing · Electrical Eng. & Systems 2025-06-17 Salah Ghamizi , Georgia Kanli , Yu Deng , Magali Perquin , Olivier Keunen