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A great number of biological organisms live in aqueous environments. Major evolutionary transitions, including the emergence of life itself, likely occurred in such environments. While the chemical aspects of the role of water in biology…

Populations and Evolution · Quantitative Biology 2020-07-01 Madison S. Krieger , Sam Sinai , Martin A. Nowak

Intracellular protein patterns govern essential cellular functions by dynamically redistributing proteins between membrane-bound and cytosolic states, conserving their total numbers. This review presents a theoretical framework for…

Biological Physics · Physics 2025-12-16 Erwin Frey , Henrik Weyer

The storage effect is a general explanation for ecological coexistence, wherein different species specialize on different states of a fluctuating environment, e.g., hot vs. cold years. Despite the storage effect's prominence in theoretical…

Populations and Evolution · Quantitative Biology 2025-06-05 Evan C. Johnson , Sean R. Connolly

There is a clear distinction between simple laminar and complex turbulent fluids. But in some cases, as for the nocturnal planetary boundary layer, a stable and well-ordered flow can develop intense and sporadic bursts of turbulent activity…

Fluid Dynamics · Physics 2015-06-17 C. Rorai , P. D. Mininni , A. Pouquet

The earliest stage of the evolution of a fully assembled planet is profoundly affected by a number of basin-forming impacts large enough to change the dynamics of its deeper interior. These impacts are in some cases quite closely spaced and…

Earth and Planetary Astrophysics · Physics 2019-01-29 Thomas Ruedas , Doris Breuer

The networks of predator-prey interactions in ecological systems are remarkably complex, but nevertheless surprisingly stable in terms of long term persistence of the system as a whole. In order to understand the mechanism driving the…

Populations and Evolution · Quantitative Biology 2015-06-05 Korinna T. Allhoff , Daniel Ritterskamp , Björn C. Rall , Barbara Drossel , Christian Guill

A variety of physical, social and biological systems generate complex fluctuations with correlations across multiple time scales. In physiologic systems, these long-range correlations are altered with disease and aging. Such correlated…

Other Quantitative Biology · Quantitative Biology 2009-11-10 Luis A. N. Amaral , Albert Diaz-Guilera , Andre A. Moreira , Ary L. Goldberger , Lewis A. Lipsitz

Animal behavior is shaped by a myriad of mechanisms acting on a wide range of scales, which hampers quantitative reasoning and the identification of general principles. Here, we combine data analysis and theory to investigate the…

Statistical Mechanics · Physics 2024-04-25 Antonio Carlos Costa , Gautam Sridhar , Claire Wyart , Massimo Vergassola

We explore the complex dynamical behavior of two simple predator-prey models of biological coevolution that on the ecological level account for interspecific and intraspecific competition, as well as adaptive foraging behavior. The…

Populations and Evolution · Quantitative Biology 2009-11-28 Per Arne Rikvold

Emergence and maintenance of excitability is often phrased in terms of arriving at and remaining about a manifold of 'solutions' embedded in a high dimensional parameter space. Alongside studies that extend traditional focus on…

Neurons and Cognition · Quantitative Biology 2016-07-22 Shimon Marom

Cyclic, nonhierarchical interactions among biological species represent a general mechanism by which ecosystems are able to maintain high levels of biodiversity. However, species coexistence is often possible only in spatially extended…

Populations and Evolution · Quantitative Biology 2015-03-17 Daniel Groselj , Frank Jenko , Erwin Frey

Pattern forming systems allow for a wealth of states, where wavelengths and orientation of patterns varies and defects disrupt patches of monocrystalline regions. Growth of patterns has long been recognized as a strong selection mechanism.…

Pattern Formation and Solitons · Physics 2023-02-28 Ryan Goh , Arnd Scheel

Microbial ecosystems are remarkably diverse, stable, and often consist of a balanced mixture of core and peripheral species. Here we propose a conceptual model exhibiting all these emergent properties in quantitative agreement with real…

Populations and Evolution · Quantitative Biology 2018-04-18 Akshit Goyal , Sergei Maslov

Double-diffusive convection driven by both thermal and compositional buoyancy in a rotating spherical shell can exhibit a rather large number of behaviours often distinct from that of the single diffusive system. In order to understand how…

Fluid Dynamics · Physics 2020-04-28 Luis Silva , James F. Mather , Radostin D. Simitev

Four problematic circumstances are considered, involving models which describe dynamical wavefunction collapse toward energy eigenstates, for which it is shown that wavefunction collapse of macroscopic objects does not work properly. In one…

Quantum Physics · Physics 2009-11-10 Philip Pearle

To further understand the complex behavior of swimming microorganisms, the spontaneous motion of nonliving matter provides essential insights. While substantial research has focused on quantitatively analyzing complex behavioral patterns,…

Soft Condensed Matter · Physics 2024-12-24 Riku Adachi , Hiroki Kojima , Takashi Ikegami

Large amplitude water waves on deep water has long been known in the sea faring community, and the cause of great concern for, e.g., oil platform constructions. The concept of such freak waves is nowadays, thanks to satellite and radar…

Chaotic Dynamics · Physics 2015-05-13 A. Grönlund , B. Eliasson , M. Marklund

Wave-exciting is a universal phenomenon in physical and biological excitable systems. Here we show that colloidal systems of Quincke rollers which are driven periodically can condense into active liquids and active crystals, in which waves…

Soft Condensed Matter · Physics 2024-07-30 Meng Fei Zhang , Bao Ying Fan , Zeng Tao Liu , Tian Hui Zhang

Rogue waves (RWs) can form on the ocean surface due to quasi-four wave resonant interaction or superposition principle. Both mechanisms have been acutely studied. The first of the two is known as the nonlinear focusing mechanism and leads…

Fluid Dynamics · Physics 2024-05-21 Yuchen He , Jinghua Wang , Jingsong He , Ye Li , Xingya Feng , Amin Chabchoub

The composition of ecological communities varies not only between different locations but also in time. Understanding the fundamental processes that drive species towards rarity or abundance is crucial to assessing ecosystem resilience and…

Populations and Evolution · Quantitative Biology 2024-11-22 Emil Mallmin , Arne Traulsen , Silvia De Monte