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Given a countable set X (usually taken to be the natural numbers or the integers), an infinite permutation \pi of X is a linear ordering of X. This paper investigates the combinatorial complexity of the infinite permutation on the natural…
The Thue--Morse sequence is a prototypical automatic sequence found in diverse areas of mathematics, and in computer science. We study occurrences of factors $w$ within this sequence, more precisely, the sequence of gaps between consecutive…
We consider avoiding squares and overlaps over the natural numbers, using a greedy algorithm that chooses the least possible integer at each step; the word generated is lexicographically least among all such infinite words. In the case of…
The observed frequency of the longest proper prefix, the longest proper suffix, and the longest infix of a word $w$ in a given sequence $x$ can be used for classifying $w$ as avoided or overabundant. The definitions used for the expectation…
A word is square-free if it does not contain a nonempty word of the form $XX$ as a factor. A famous 1906 result of Thue asserts that there exist arbitrarily long square-free words over a $3$-letter alphabet. We study square-free words with…
Flat iteration is a variation on the original binary version of the Kleene star operation P*Q, obtained by restricting the first argument to be a sum of atomic actions. It generalizes prefix iteration, in which the first argument is a…
Splicing systems are generative mechanisms introduced by Tom Head in 1987 to model the biological process of DNA recombination. The computational engine of a splicing system is the "splicing operation", a cut-and-paste binary string…
By replacing the letters to polynomials in F_2[t], an infinite word, over a finite alphabet, can be seen as the sequence of partial quotients of a continued fraction in F_2((1/t)). Here is described a family of such infinite words,…
We study the $k$-Bonacci word over the infinite alphabet $\mathbb{N}$. Since the alphabet is infinite, the usual factor complexity is infinite and does not provide any information. We therefore investigate factor occurrence statistics in…
Permutations can be viewed as pairs of linear orders, or more formally as models over a signature consisting of two binary relation symbols. This approach was adopted by Albert, Bouvel and F\'eray, who studied the expressibility of…
In 2011, Fici and Lipt\'ak introduced prefix normal words. A binary word is prefix normal if it has no factor (substring) that contains more occurrences of the letter 1 than the prefix of the same length. Among the open problems regarding…
Given a string $T$, it is known that its suffix tree can be represented using the compact directed acyclic word graph (CDAWG) with $e_T$ arcs, taking overall $O(e_T+e_{{\overline{T}}})$ words of space, where ${\overline{T}}$ is the reverse…
We explore a family of nested recurrence relations with arbitrary levels of nesting, which have an interpretation in terms of fixed points of morphisms over a countably infinite alphabet. Recurrences in this family are related to a number…
The associative operad is a central structure in operad theory, defined on the linear span of the set of permutations. We build two analogs of the associative operad on the linear span of the set of packed words which turn out to be…
Any infinite uniformly recurrent word ${\bf u}$ can be written as concatenation of a finite number of return words to a chosen prefix $w$ of ${\bf u}$. Ordering of the return words to $w$ in this concatenation is coded by derivated word…
The problem of identifying a probabilistic context free grammar has two aspects: the first is determining the grammar's topology (the rules of the grammar) and the second is estimating probabilistic weights for each rule. Given the hardness…
We study the reactive synthesis problem for distributed systems with an unbounded number of participants interacting with an uncontrollable environment. Executions of those systems are modeled by data words, and specifications are given as…
Good words are binary words avoiding factors 11 and 1001, and patterns 0000 and 00010100. We show that good words bear the same relationship to the period-doubling sequence that overlap-free words bear to the Thue-Morse sequence. We prove…
Fixed points ${\bf u}=\varphi({\bf u})$ of marked and primitive morphisms $\varphi$ over arbitrary alphabet are considered. We show that if ${\bf u}$ is palindromic, i.e., its language contains infinitely many palindromes, then some power…
The periodic (ordinal) patterns of a map are the permutations realized by the relative order of the points in its periodic orbits. We give a combinatorial characterization of the periodic patterns of an arbitrary signed shift, in terms of…