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Related papers: Cellular dynamics emerging from turbulent flows st…

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In this paper, we showcase how flow obstruction by a deformable object can lead to symmetry breaking in curved domains subject to angular acceleration. Our analysis is motivated by the deflection of the cupula, a soft tissue located in the…

Fluid Dynamics · Physics 2025-11-06 Javier Chico-Vázquez , Derek E. Moulton , Dominic Vella

Dynamic organization of the cytoskeletal filaments and rod-like proteins in the cell membrane and other biological interfaces occurs in many cellular processes. Previous modeling studies have considered the dynamics of a single rod on fluid…

Fluid Dynamics · Physics 2022-06-17 Wenzheng Shi , Moslem Moradi , Ehssan Nazockdast

We introduce a phenomenological model to study the properties of bundles of polar filaments which interact via active elements. The stability of the homogeneous state, the attractors of the dynamics in the unstable regime and the tensile…

Statistical Mechanics · Physics 2009-10-31 Karsten Kruse , Frank Julicher

In the context of finite elasticity, we propose plate models describing the spontaneous bending of nematic elastomer thin films due to variations along the thickness of the nematic order parameters. Reduced energy functionals are deduced…

Analysis of PDEs · Mathematics 2017-02-03 Virginia Agostiniani , Antonio DeSimone

We formulate the statistical dynamics of topological defects in the active nematic phase, formed in two dimensions by a collection of self-driven particles on a substrate. An important consequence of the non-equilibrium drive is the…

Soft Condensed Matter · Physics 2018-09-12 Suraj Shankar , Sriram Ramaswamy , M. Cristina Marchetti , Mark J. Bowick

We adapt the Halperin-Mazenko formalism to analyze two-dimensional active nematics coupled to a generic fluid flow. The governing hydrodynamic equations lead to evolution laws for nematic topological defects and their corresponding density…

Soft Condensed Matter · Physics 2021-05-11 Luiza Angheluta , Zhitao Chen , M. Cristina Marchetti , Mark J. Bowick

We propose a simple mathematical model to describe the mechanical relaxation of cells within a curved epithelial tissue layer represented by an arbitrary curve in two-dimensional space. This model generalises previous one-dimensional models…

Cellular Automata and Lattice Gases · Physics 2025-01-09 Pascal R. Buenzli , Shahak Kuba , Ryan J. Murphy , Matthew J. Simpson

Collective cell motions underlie structure formation during embryonic development. Tissues exhibit emergent multicellular characteristics such as jamming, rigidity transitions, and glassy dynamics, but there remain questions about how those…

Biological Physics · Physics 2023-12-13 Evan Thomas , Sevan Hopyan

We consider active nematodynamics on deformable surfaces. Based on a thermodynamically consistent surface Beris-Edwards model we add nematic activity and focus on the emerging additional coupling mechanism between the nematic field, the…

Soft Condensed Matter · Physics 2024-05-24 Ingo Nitschke , Axel Voigt

Topological defects are distinctive signatures of liquid crystals. They profoundly affect the viscoelastic behavior of the fluid by constraining the orientational structure in a way that inevitably requires global changes not achievable…

Soft Condensed Matter · Physics 2015-06-19 Luca Giomi , Mark J. Bowick , Prashant Mishra , Rastko Sknepnek , M. Cristina Marchetti

Growing experimental evidence shows that cell monolayers can induce long-lived perturbations to their environment, akin to footprints, which in turn influence the global dynamics of the system. Inspired by these observations, we propose a…

Soft Condensed Matter · Physics 2024-09-10 Samuel Bell , Joseph Ackermann , Ananyo Maitra , Raphael Voituriez

We present a model for the dynamics of fluid vesicles in linear flow which consistently includes thermal fluctuations and nonlinear coupling between different modes. At the transition between tank-treading and tumbling, we predict a…

Soft Condensed Matter · Physics 2013-06-10 David Abreu , Udo Seifert

We investigate similarities in the micro-structural dynamics between externally driven and actively driven nematics. Walls, lines of strong deformations in the director field, and topological defects are characteristic features of an active…

Soft Condensed Matter · Physics 2015-04-28 Sumesh P. Thampi , Ramin Golestanian , Julia M. Yeomans

We investigate the turbulent dynamics of a two-dimensional active nematic liquid crystal con- strained on a curved surface. Using a combination of hydrodynamic and particle-based simulations, we demonstrate that the fundamental structural…

Soft Condensed Matter · Physics 2019-05-01 D. J. G. Pearce , Perry W. Ellis , Alberto Fernandez-Nieves , L. Giomi

We study the fluctuational behavior of overdamped elastic filaments (e.g., strings or rods) driven by active matter which induces irreversibility. The statistics of discrete normal modes are translated into the continuum of the position…

Soft Condensed Matter · Physics 2024-03-19 John C. Neu , Stephen W. Teitsworth

Biological systems achieve precise control over ambient fluids through the self-organization of active protein structures including flagella, cilia, and cytoskeletal networks. In active structures individual proteins consume chemical energy…

Active matter research focuses on the emergent behavior among interacting self-propelled particles. Unification of seemingly disconnected paradigms -- active phase-separation of repulsive discs and collective motion of self-propelled rods…

Statistical Mechanics · Physics 2021-01-18 Robert Großmann , Igor S. Aranson , Fernando Peruani

Recent advances in cell biology and experimental techniques using reconstituted cell extracts have generated significant interest in understanding how geometry and topology influence active fluid dynamics. In this work, we present a…

Soft Condensed Matter · Physics 2024-05-13 Cuncheng Zhu , David Saintillan , Albert Chern

The alignment of fibers and cells in living tissues affect their mechanical properties and functionality. In this context, one can draw an analogy between tissues and nematic liquid crystal elastomers. We explore this analogy by growing…

Soft Condensed Matter · Physics 2025-10-08 Kirsten Endresen , Aniruddh Murali , Birte Geerds , Daniel J. G. Pearce , Francesca Serra

We predict spontaneous nematic order in an ensemble of active force generators with elastic interactions as a minimal model for early nematic alignment of short stress fibers in non-motile, adhered cells. Mean-field theory is formally…

Biological Physics · Physics 2015-05-20 Benjamin M. Friedrich , Samuel A. Safran