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Epigenetic clocks based on DNA methylation have emerged as powerful tools for estimating biological age, with broad applications in aging research, age-related disease studies, and longevity science. Despite advances across machine learning…

Artificial Intelligence · Computer Science 2026-05-12 Yao Li , Xikun Zhang , Xiaotao Shen , Sonika Tyagi , Xin Zheng , Jiaxing Huang , Feng Xia

Aging clocks aim to estimate biological age, a measure of physiological state distinct from chronological age, from observable biomarkers, and are widely used for health assessment and disease analysis. DNA methylation is a particularly…

Machine Learning · Computer Science 2026-05-11 Qing Qing , Xikun Zhang , Zhongyuan Zhang , Jiarui Liu , Xingtong Yu , Xiaotao Shen , Ziqi Xu , Qixin Zhang , Zhe Wang , Renqiang Luo

DNA methylation is a crucial epigenetic marker used in various clocks to predict epigenetic age. However, many existing clocks fail to account for crucial information about CpG sites and their interrelationships, such as co-methylation…

Quantitative Methods · Quantitative Biology 2024-08-05 Saleh Sakib Ahmed , Nahian Shabab , Md. Abul Hassan Samee , M. Sohel Rahman

Interrogating the evolution of biological changes at early stages of life requires longitudinal profiling of molecules, such as DNA methylation, which can be challenging with children. We introduce a probabilistic and longitudinal machine…

Genomics · Quantitative Biology 2025-04-24 Arthur Leroy , Ai Ling Teh , Frank Dondelinger , Mauricio A. Alvarez , Dennis Wang

Epigenetic aging clocks play a pivotal role in estimating an individual's biological age through the examination of DNA methylation patterns at numerous CpG (Cytosine-phosphate-Guanine) sites within their genome. However, making valid…

Machine Learning · Statistics 2026-01-21 Zhe Fei , Yi Li

Over the last years, huge resources of biological and medical data have become available for research. This data offers great chances for machine learning applications in health care, e.g. for precision medicine, but is also challenging to…

Quantitative Methods · Quantitative Biology 2016-12-21 Lisa Handl , Adrin Jalali , Michael Scherer , Nico Pfeifer

The study of signatures of aging in terms of genomic biomarkers can be uniquely helpful in understanding the mechanisms of aging and developing models to accurately predict the age. Prior studies have employed gene expression and DNA…

Genomics · Quantitative Biology 2021-11-08 Salman Mohamadi , Gianfranco. Doretto , Nasser M. Nasrabadi , Donald A. Adjeroh

Biological age, which may be older or younger than chronological age due to factors such as genetic predisposition, environmental exposures, serves as a meaningful biomarker of aging processes and can inform risk stratification, treatment…

Genomics · Quantitative Biology 2025-11-11 Shuyue Jiang , Wenjing Ma , Shaojun Yu , Chang Su , Runze Yan , Jiaying Lu

Machine-learning-based age estimation has received lots of attention. Traditional age estimation mechanism focuses estimation age error, but ignores that there is a deviation between the estimated age and real age due to disease.…

Computer Vision and Pattern Recognition · Computer Science 2021-03-12 Fan Li , Yongming Li , Pin Wang , Jie Xiao , Fang Yan , Xinke Li

This paper explores the transgenerational DNA methylation pattern (DNA methylation transmitted from one generation to the next) via a clustering approach. Beta regression is employed to model the transmission pattern from parents to their…

Predicting an individual's aging trajectory is a central challenge in preventative medicine and bioinformatics. While machine learning models can predict chronological age from biomarkers, they often fail to capture the dynamic,…

Machine Learning · Computer Science 2025-08-14 Nazira Dunbayeva , Yulong Li , Yutong Xie , Imran Razzak

The research reported in this paper identifies the epigenetic biomarker (methylation beta pattern) of breast cancer. Many cancers are triggered by abnormal gene expression levels caused by aberrant methylation of CpG sites in the DNA. In…

Genomics · Quantitative Biology 2019-10-16 Maxim Vaysburd

Epigenetics is the study of how people's behavior and environments influence the way their genes are expressed, even though their DNA sequence is itself unchanged. By aggregating age-related epigenetic markers, epigenetic 'clocks' have…

General Economics · Economics 2025-09-19 Giorgia Menta , Pietro Biroli , Divya Mehta , Conchita D'Ambrosio , Deborah Cobb-Clark

This paper presents a novel deep learning-based approach for simultaneous age and gender classification from facial images, designed to enhance the effectiveness of targeted advertising campaigns. We propose a custom Convolutional Neural…

Computer Vision and Pattern Recognition · Computer Science 2025-07-25 Muhammad Imran Zaman , Nisar Ahmed

Motivation: DNA methylation is an intensely studied epigenetic mark, yet its functional role is incompletely understood. Attempts to quantitatively associate average DNA methylation to gene expression yield poor correlations outside of the…

Genomics · Quantitative Biology 2016-11-17 Chantriolnt-Andreas Kapourani , Guido Sanguinetti

Age estimation is a difficult task which requires the automatic detection and interpretation of facial features. Recently, Convolutional Neural Networks (CNNs) have made remarkable improvement on learning age patterns from benchmark…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-23 Zhenzhen Hui , Peng Sun , Yonggang Wen

Background: Recent assays for individual-specific genome-wide DNA methylation profiles have enabled epigenome-wide association studies to identify specific CpG sites associated with a phenotype. Computational prediction of CpG site-specific…

Genomics · Quantitative Biology 2015-11-12 Weiwei Zhang , Tim D Spector , Panos Deloukas , Jordana T Bell , Barbara E Engelhardt

Epigenetic alterations have an important role in the development of several types of cancer. Epigenetic studies generate a large amount of data, which makes it essential to develop novel models capable of dealing with large-scale data. In…

Machine Learning · Computer Science 2021-02-22 del Amor Rocío , Colomer Adrián , Monteagudo Carlos , Naranjo Valery

Cardiovascular diseases remain the leading global cause of mortality. Age is an important covariate whose effect is most easily investigated in a healthy cohort to properly distinguish the former from disease-related changes. Traditionally,…

Signal Processing · Electrical Eng. & Systems 2024-04-23 Gabriel Ott , Yannik Schaubelt , Juan Miguel Lopez Alcaraz , Wilhelm Haverkamp , Nils Strodthoff

This paper is focused on the automatic extraction of persons and their attributes (gender, year of born) from album of photos and videos. We propose the two-stage approach, in which, firstly, the convolutional neural network simultaneously…

Computer Vision and Pattern Recognition · Computer Science 2019-06-18 Andrey V. Savchenko
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