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We present pyBoLaNO, a Python symbolic package based on SymPy to quickly normal-order (Wick-order) any polynomial in bosonic ladder operators. By extension, this package offers the normal ordering of commutators of any two polynomials in…

Quantum Physics · Physics 2025-04-23 Hendry M. Lim , Donny Dwiputra , M. Shoufie Ukhtary , Ahmad R. T. Nugraha

This paper introduces BLIP-3, an open framework for developing Large Multimodal Models (LMMs). The framework comprises meticulously curated datasets, a training recipe, model architectures, and a resulting suite of LMMs. We release 4B and…

We introduce Merlion, an open-source machine learning library for time series. It features a unified interface for many commonly used models and datasets for anomaly detection and forecasting on both univariate and multivariate time series,…

The rapid evolution of software libraries presents a significant challenge for code generation models, which must adapt to frequent version updates while maintaining compatibility with previous versions. Existing code completion benchmarks…

Software Engineering · Computer Science 2024-11-12 Nizar Islah , Justine Gehring , Diganta Misra , Eilif Muller , Irina Rish , Terry Yue Zhuo , Massimo Caccia

This is a companion Focus Demonstration article to the PyMUSE python package, demonstrating its usage and utilities for VLT/MUSE data analysis, that include a wide range of options for spectra extractions, the creation of different types of…

Instrumentation and Methods for Astrophysics · Physics 2018-03-20 Ismael Pessa , Nicolas Tejos , Cristobal Moya

Library migration is the process of replacing one library with another library that provides similar functionality. Manual library migration is time consuming and error prone, as it requires developers to understand the APIs of both…

Software Engineering · Computer Science 2025-10-14 Md Mohayeminul Islam , Ajay Kumar Jha , May Mahmoud , Ildar Akhmetov , Sarah Nadi

We present the development of pyLLE, a freely accessible and cross-platform Lugiato-Lefever equation solver programmed in Python and Julia and optimized for the simulation of microresonator frequency combs. Examples illustrating its…

Mathematical Software · Computer Science 2019-05-31 Gregory Moille , Qing Li , Xiyuan Lu , Kartik Srinivasan

There is a need for open-source libraries in emission tomography that (i) use modern and popular backend code to encourage community contributions and (ii) offer support for the multitude of reconstruction techniques available in recent…

Different security issues are a common problem for open source packages archived to and delivered through software ecosystems. These often manifest themselves as software weaknesses that may lead to concrete software vulnerabilities. This…

Software Engineering · Computer Science 2021-12-28 Jukka Ruohonen , Kalle Hjerppe , Kalle Rindell

BioImageLoader (BIL) is a python library that handles bioimage datasets for machine learning applications, easing simple workflows and enabling complex ones. BIL attempts to wrap the numerous and varied bioimages datasets in unified…

Quantitative Methods · Quantitative Biology 2023-03-07 Seongbin Lim , Xingjian Zhang , Emmanuel Beaurepaire , Anatole Chessel

There has been an explosion in interest in machine learning (ML) in recent years due to its applications to science and engineering. However, as ML techniques have advanced, tools for explaining and visualizing novel ML algorithms have…

Machine Learning · Computer Science 2023-11-16 Alec Helbling , Duen Horng Chau

SOL is an open-source library for scalable online learning algorithms, and is particularly suitable for learning with high-dimensional data. The library provides a family of regular and sparse online learning algorithms for large-scale…

Machine Learning · Computer Science 2016-10-31 Yue Wu , Steven C. H. Hoi , Chenghao Liu , Jing Lu , Doyen Sahoo , Nenghai Yu

Machine learning (ML), especially with the emergence of large language models (LLMs), has significantly transformed various industries. However, the transition from ML model prototyping to production use within software systems presents…

Software Engineering · Computer Science 2024-01-15 Hala Abdelkader , Mohamed Abdelrazek , Scott Barnett , Jean-Guy Schneider , Priya Rani , Rajesh Vasa

Artificial Intelligence (AI) and Machine Learning (ML) are pervasive in the current computer science landscape. Yet, there still exists a lack of software engineering experience and best practices in this field. One such best practice,…

Software Engineering · Computer Science 2021-03-09 Bart van Oort , Luís Cruz , Maurício Aniche , Arie van Deursen

Malicious package detection has become a critical task in ensuring the security and stability of the PyPI. Existing detection approaches have focused on advancing model selection, evolving from traditional machine learning (ML) models to…

Cryptography and Security · Computer Science 2025-06-18 Xingan Gao , Xiaobing Sun , Sicong Cao , Kaifeng Huang , Di Wu , Xiaolei Liu , Xingwei Lin , Yang Xiang

Wax is what you put on a surfboard to avoid slipping. It is an essential tool to go surfing... We introduce WAX-ML a research-oriented Python library providing tools to design powerful machine learning algorithms and feedback loops working…

Machine Learning · Computer Science 2021-06-14 Emmanuel Sérié

As data are generated more and more from multiple disparate sources, multiview data sets, where each sample has features in distinct views, have ballooned in recent years. However, no comprehensive package exists that enables…

imbalanced-ensemble, abbreviated as imbens, is an open-source Python toolbox for leveraging the power of ensemble learning to address the class imbalance problem. It provides standard implementations of popular ensemble imbalanced learning…

Machine Learning · Computer Science 2023-02-24 Zhining Liu , Jian Kang , Hanghang Tong , Yi Chang

Building language models (LMs), especially small and medium ones, remains more art than science. While large LMs often improve by sheer scale, it is still unclear why many design choices work. For small LMs, this uncertainty is more…

Computation and Language · Computer Science 2025-09-23 Richard Diehl Martinez , David Demitri Africa , Yuval Weiss , Suchir Salhan , Ryan Daniels , Paula Buttery

Multi-modal Large Language Models (MLLMs) have demonstrated strong capabilities in general-purpose perception and reasoning, but they still struggle with tasks that require spatial understanding of the 3D world. To address this, we…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Zhanpeng Luo , Ce Zhang , Silong Yong , Cunxi Dai , Qianwei Wang , Haoxi Ran , Guanya Shi , Katia Sycara , Yaqi Xie