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In response to the rapidly evolving nature of adversarial attacks against visual classifiers, numerous defenses have been proposed to generalize against as many known attacks as possible. However, designing a defense method that generalizes…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Qian Wang , Hefei Ling , Yingwei Li , Qihao Liu , Ruoxi Jia , Ning Yu

Arbitrary shape text detection is a challenging task due to the high variety and complexity of scenes texts. In this paper, we propose a novel unified relational reasoning graph network for arbitrary shape text detection. In our method, an…

Computer Vision and Pattern Recognition · Computer Science 2020-09-01 Shi-Xue Zhang , Xiaobin Zhu , Jie-Bo Hou , Chang Liu , Chun Yang , Hongfa Wang , Xu-Cheng Yin

Automated Radiology report generation (RRG) aims at producing detailed descriptions of medical images, reducing radiologists' workload and improving access to high-quality diagnostic services. Existing encoder-decoder models only rely on…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Quang Vinh Nguyen , Minh Duc Nguyen , Thanh Hoang Son Vo , Hyung-Jeong Yang , Soo-Hyung Kim

Predicting compound-protein affinity is critical for accelerating drug discovery. Recent progress made by machine learning focuses on accuracy but leaves much to be desired for interpretability. Through molecular contacts underlying…

Biomolecules · Quantitative Biology 2020-01-01 Mostafa Karimi , Di Wu , Zhangyang Wang , Yang Shen

We present a robust method to find region-level correspondences between shapes, which are invariant to changes in geometry and applicable across multiple shape representations. We generate simplified shape graphs by jointly decomposing the…

Graphics · Computer Science 2018-03-06 Yanir Kleiman , Maks Ovsjanikov

Network biology has been successfully used to help reveal complex mechanisms of disease, especially cancer. On the other hand, network biology requires in-depth knowledge to construct disease-specific networks, but our current knowledge is…

Computer Vision and Pattern Recognition · Computer Science 2018-06-18 Sungmin Rhee , Seokjun Seo , Sun Kim

Protein-ligand binding prediction is a fundamental problem in AI-driven drug discovery. Prior work focused on supervised learning methods using a large set of binding affinity data for small molecules, but it is hard to apply the same…

Biomolecules · Quantitative Biology 2023-12-14 Wengong Jin , Siranush Sarkizova , Xun Chen , Nir Hacohen , Caroline Uhler

Affinity maturation produces antibodies that bind antigens with high specificity by accumulating mutations in the antibody sequence. Mapping out the antibody-antigen affinity landscape can give us insight into the accessible paths during…

Populations and Evolution · Quantitative Biology 2019-05-14 Rhys M. Adams , Justin B. Kinney , Aleksandra M. Walczak , Thierry Mora

Graph Attention Networks(GATs) are useful deep learning models to deal with the graph data. However, recent works show that the classical GAT is vulnerable to adversarial attacks. It degrades dramatically with slight perturbations.…

Machine Learning · Computer Science 2022-08-05 Xianchen Zhou , Yaoyun Zeng , Hongxia Wang

Adverse drug reactions (ADRs) are a major barrier to safe and effective pharmacotherapy and increasingly reflect higher order interactions between drugs, genetic background, and clinical phenotypes. Existing graph based approaches usually…

Quantitative Methods · Quantitative Biology 2025-12-02 Ze Cai , Haotian Tang , Shuai Gao , Binbin Zhou , Junhan Zhao , Jun Wen

Machine Learning-assisted directed evolution (MLDE) is a powerful tool for efficiently navigating antibody fitness landscapes. Many structure-aware MLDE pipelines rely on a single conformation or a single committee across all conformations,…

Machine Learning · Computer Science 2025-12-03 Mia Adler , Carrie Liang , Brian Peng , Oleg Presnyakov , Justin M. Baker , Jannelle Lauffer , Himani Sharma , Barry Merriman

Few-Shot Industrial Visual Anomaly Detection (FS-IVAD) comprises a critical task in modern manufacturing settings, where automated product inspection systems need to identify rare defects using only a handful of normal/defect-free training…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Aggelos Psiris , Yannis Panagakis , Maria Vakalopoulou , Georgios Th. Papadopoulos

Binding affinity prediction of three-dimensional (3D) protein ligand complexes is critical for drug repositioning and virtual drug screening. Existing approaches transform a 3D protein-ligand complex to a two-dimensional (2D) graph, and…

Biomolecules · Quantitative Biology 2022-10-31 Yiqiang Yi , Xu Wan , Kangfei Zhao , Le Ou-Yang , Peilin Zhao

Face recognition (FR) systems powered by deep learning have become widely used in various applications. However, they are vulnerable to adversarial attacks, especially those based on local adversarial patches that can be physically applied…

Computer Vision and Pattern Recognition · Computer Science 2023-11-30 Xiaoliang Liu , Furao Shen , Jian Zhao , Changhai Nie

The detection of the abnormal area from urban data is a significant research problem. However, to the best of our knowledge, previous methods designed on spatio-temporal anomalies are road-based or grid-based, which usually causes the data…

Social and Information Networks · Computer Science 2020-07-16 Huaishao Luo , Chuishi Meng , Bowen Wu , Junbo Zhang , Tianrui Li , Yu Zheng

Confounding pathology with normal anatomical variation remains a significant challenge in unsupervised medical-image anomaly detection, resulting in numerous false positives. To enhance integration of healthy variation, we augment the…

Quantitative Methods · Quantitative Biology 2026-03-09 P. Bilha Githinji , Xi Yuan , Ijaz Gul , Lian Zhang , Jinhao Xu , Zhenglin Chen , Peiwu Qin , Dongmei Yu

Image-to-image translation is an ill-posed problem as unique one-to-one mapping may not exist between the source and target images. Learning-based methods proposed in this context often evaluate the performance on test data that is similar…

Image and Video Processing · Electrical Eng. & Systems 2021-10-08 Uddeshya Upadhyay , Viswanath P. Sudarshan , Suyash P. Awate

Graph anomaly detection (GAD) aims to identify nodes that deviate from normal patterns in structure or features. While recent GNN-based approaches have advanced this task, they struggle with two major challenges: 1) homophily disparity,…

Machine Learning · Computer Science 2026-03-10 Yunhui Liu , Qizhuo Xie , Yinfeng Chen , Xudong Jin , Tao Zheng , Bin Chong , Tieke He

Modern cyberattacks in cyber-physical systems (CPS) rapidly evolve and cannot be deterred effectively with most current methods which focused on characterizing past threats. Adaptive anomaly detection (AAD) is among the most promising…

Cryptography and Security · Computer Science 2025-06-27 Pablo Moriano , Steven C. Hespeler , Mingyan Li , Maria Mahbub

This study introduces a novel approach for inferring social network structures using Aggregate Relational Data (ARD), addressing the challenge of limited detailed network data availability. By integrating ARD with variational approximation…

Econometrics · Economics 2025-09-04 Xunkang Tian
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