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Machine learning techniques have become increasingly popular in the field of resting state fMRI (functional magnetic resonance imaging) network based classification. However, the application of convolutional networks has been proposed only…

Machine Learning · Statistics 2017-07-24 Regina Meszlényi , Krisztian Buza , Zoltán Vidnyánszky

Understanding brain dynamics through functional Magnetic Resonance Imaging (fMRI) remains a fundamental challenge in neuroscience, particularly in capturing how the brain transitions between various functional states. Recently,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-01 Yanwu Yang , Thomas Wolfers

Human reading behavior is tuned to the statistics of natural language: the time it takes human subjects to read a word can be predicted from estimates of the word's probability in context. However, it remains an open question what…

Computation and Language · Computer Science 2020-06-04 Ethan Gotlieb Wilcox , Jon Gauthier , Jennifer Hu , Peng Qian , Roger Levy

Neuroimaging-based prediction methods for intelligence and cognitive abilities have seen a rapid development in literature. Among different neuroimaging modalities, prediction based on functional connectivity (FC) has shown great promise.…

Neurons and Cognition · Quantitative Biology 2023-07-20 Yang Li , Xin Ma , Raj Sunderraman , Shihao Ji , Suprateek Kundu

With the wide adoption of functional magnetic resonance imaging (fMRI) by cognitive neuroscience researchers, large volumes of brain imaging data have been accumulated in recent years. Aggregating these data to derive scientific insights…

Applications · Statistics 2020-06-01 Ming Bo Cai , Michael Shvartsman , Anqi Wu , Hejia Zhang , Xia Zhu

A great improvement to the insight on brain function that we can get from fMRI data can come from effective connectivity analysis, in which the flow of information between even remote brain regions is inferred by the parameters of a…

Neurons and Cognition · Quantitative Biology 2012-08-21 G. Wu , W. Liao , S. Stramaglia , J. Ding , H. Chen , D. Marinazzo

Understanding how brain functions has been an intriguing topic for years. With the recent progress on collecting massive data and developing advanced technology, people have become interested in addressing the challenge of decoding brain…

Neurons and Cognition · Quantitative Biology 2016-12-01 Jingkang Yang , Haohan Wang , Jun Zhu , Eric P. Xing

Functional magnetic resonance imaging (fMRI) enables noninvasive investigation of brain function, while short clinical scan durations, arising from human and non-human factors, usually lead to reduced data quality and limited statistical…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Yunlong Gao , Jinbo Yang , Li Xiao , Haiye Huo , Yang Ji , Hao Wang , Aiying Zhang , Yu-Ping Wang

Diverse cognitive processes set different demands on locally segregated and globally integrated brain activity. However, it remains unclear how resting brains configure their functional organization to balance the demands on network…

Neurons and Cognition · Quantitative Biology 2022-04-25 Rong Wang , Mianxin Liu , Xinhong Cheng , Ying Wu , Andrea Hildebrandt , Changsong Zhou

We propose a hierarchical Bayesian recurrent state space model for modeling switching network connectivity in resting state fMRI data. Our model allows us to uncover shared network patterns across disease conditions. We evaluate our method…

Machine Learning · Statistics 2020-11-17 Arunesh Mittal , Scott Linderman , John Paisley , Paul Sajda

Pretrained language models are remarkably effective in aligning with human brain responses elicited by natural language stimuli, positioning them as promising model organisms for studying language processing in the brain. However, existing…

Computation and Language · Computer Science 2025-10-27 Omer Moussa , Mariya Toneva

Modeling spatiotemporal brain dynamics from high-dimensional data, such as functional Magnetic Resonance Imaging (fMRI), is a formidable task in neuroscience. Existing approaches for fMRI analysis utilize hand-crafted features, but the…

Computer Vision and Pattern Recognition · Computer Science 2023-11-01 Peter Yongho Kim , Junbeom Kwon , Sunghwan Joo , Sangyoon Bae , Donggyu Lee , Yoonho Jung , Shinjae Yoo , Jiook Cha , Taesup Moon

Disorders of consciousness are a heterogeneous mixture of different diseases or injuries. Although some indicators and models have been proposed for prognostication, any single method when used alone carries a high risk of false prediction.…

Neurons and Cognition · Quantitative Biology 2018-09-10 Ming Song , Yi Yang , Jianghong He , Zhengyi Yang , Shan Yu , Qiuyou Xie , Xiaoyu Xia , Yuanyuan Dang , Qiang Zhang , Xinhuai Wu , Yue Cui , Bing Hou , Ronghao Yu , Ruxiang Xu , Tianzi Jiang

In recent years, functional magnetic resonance imaging (fMRI) has been widely utilized to diagnose neurological disease, by exploiting the region of interest (RoI) nodes as well as their connectivities in human brain. However, most of…

Image and Video Processing · Electrical Eng. & Systems 2023-09-18 Xiangzhu Meng , Qiang Liu , Shu Wu , Liang Wang

Understanding functional representations within higher visual cortex is a fundamental question in computational neuroscience. While artificial neural networks pretrained on large-scale datasets exhibit striking representational alignment…

Resting state fMRI is an imaging modality which reveals brain activity localization through signal changes, in what is known as Resting State Networks (RSNs). This technique is gaining popularity in neurosurgical pre-planning to visualize…

Machine Learning · Computer Science 2022-09-22 Sejal Ghate , Alberto Santamaria-Pang , Ivan Tarapov , Haris I Sair , Craig K Jones

This study investigated the dynamic connectivity patterns between EEG and fMRI modalities, contributing to our understanding of brain network interactions. By employing a comprehensive approach that integrated static and dynamic analyses of…

Machine Learning · Computer Science 2024-12-02 Guiran Liu , Binrong Zhu

A reliable foundation model of functional neuroimages is critical to promote clinical applications where the performance of current AI models is significantly impeded by a limited sample size. To that end, tremendous efforts have been made…

Machine Learning · Computer Science 2025-10-23 Ziquan Wei , Tingting Dan , Guorong Wu

Recently, the potential of dynamic brain networks as a neuroimaging biomarkers for mental illnesses is being increasingly recognized. However, there are several unmet challenges in developing such biomarkers, including the need for methods…

Neurons and Cognition · Quantitative Biology 2019-10-10 Suprateek Kundu , Jin Ming , Jennifer Stevens

Network control theory has recently emerged as a promising approach for understanding brain function and dynamics. By operationalizing notions of control theory for brain networks, it offers a fundamental explanation for how brain dynamics…

Quantitative Methods · Quantitative Biology 2020-03-20 Shikuang Deng , Shi Gu