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Related papers: MAMBO: a lightweight ontology for multiscale mater…

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A comprehensive understanding of molecular structures is important for the prediction of molecular ground-state conformation involving property information. Meanwhile, state space model (e.g., Mamba) has recently emerged as a promising…

Chemical Physics · Physics 2025-11-14 Yuxin Gou , Aming Wu , Richang Hong , Meng Wang

Ontologies provide formal representation of knowledge shared within Semantic Web applications. Ontology learning involves the construction of ontologies from a given corpus. In the past years, ontology learning has traversed through shallow…

Information Retrieval · Computer Science 2024-06-18 Rick Du , Huilong An , Keyu Wang , Weidong Liu

This paper introduces a new ontology for Materials Science Laboratory Equipment, termed MSLE. A fundamental issue with materials science laboratory (hereafter lab) equipment in the real world is that scientists work with various types of…

Artificial Intelligence · Computer Science 2023-08-17 Mehrdad Jalali , Matthias Mail , Rossella Aversa , Christian Kübel

Molecular optimization is a fundamental goal in the chemical sciences and is of central interest to drug and material design. In recent years, significant progress has been made in solving challenging problems across various aspects of…

Computational Engineering, Finance, and Science · Computer Science 2022-10-11 Wenhao Gao , Tianfan Fu , Jimeng Sun , Connor W. Coley

Materials informatics, data-enabled investigation, is a "fourth paradigm" in materials science research after the conventional empirical approach, theoretical science, and computational research. Materials informatics has two essential…

Materials Science · Physics 2023-05-09 Bhupesh Bishnoi

As semiconductor devices scale to new dimensions, the materials and designs become more dependent on atomic details. NEMO5 is a nanoelectronics modeling package designed for comprehending the critical multi-scale, multi-physics phenomena…

Mesoscale and Nanoscale Physics · Physics 2013-10-18 J. E. Fonseca , T. Kubis , M. Povolotskyi , B. Novakovic , A. Ajoy , G. Hegde , H. Ilatikhameneh , Z. Jiang , P. Sengupta , Y. Tan , G. Klimeck

We introduce M$^2$Hub, a toolkit for advancing machine learning in materials discovery. Machine learning has achieved remarkable progress in modeling molecular structures, especially biomolecules for drug discovery. However, the development…

Metal-organic frameworks (MOFs) are porous crystalline materials with broad applications such as carbon capture and drug delivery, yet accurately predicting their 3D structures remains a significant challenge. While Large Language Models…

Machine Learning · Computer Science 2026-01-15 Mianzhi Pan , JianFei Li , Peishuo Liu , Botian Wang , Yawen Ouyang , Yiming Rong , Hao Zhou , Jianbing Zhang

The rapid advancement of artificial intelligence in materials science requires data standards and data management practices that can capture the complexity of real-world structures, including surfaces, interfaces, defects, and…

Materials Science · Physics 2026-02-17 Vsevolod Biryukov , Kamal Choudhary , Timur Bazhirov

MKM has been defined as the quest for technologies to manage mathematical knowledge. MKM "in the small" is well-studied, so the real problem is to scale up to large, highly interconnected corpora: "MKM in the large". We contend that…

Other Computer Science · Computer Science 2015-03-17 Michael Kohlhase , Florian Rabe , Vyacheslav Zholudev

The critical lack of structured terminological data for South Africa's official languages hampers progress in multilingual NLP, despite the existence of numerous government and academic terminology lists. These valuable assets remain…

Ontologies are widely used in materials science to describe experiments, processes, material properties, and experimental and computational workflows. Numerous online platforms are available for accessing and sharing ontologies in Materials…

Information Retrieval · Computer Science 2024-08-13 Ebrahim Norouzi , Jörg Waitelonis , Harald Sack

In applied mathematics and related disciplines, the modeling-simulation-optimization workflow is a prominent scheme, with mathematical models and numerical algorithms playing a crucial role. For these types of mathematical research data,…

The representation of workflows and processes is essential in materials science engineering, where experimental and computational reproducibility depend on structured and semantically coherent process models. Although numerous ontologies…

Information Retrieval · Computer Science 2025-09-30 Ebrahim Norouzi , Sven Hertling , Jörg Waitelonis , Harald Sack

Neuromorphic computing approaches become increasingly important as we address future needs for efficiently processing massive amounts of data. The unique attributes of quantum materials can help address these needs by enabling new…

Business ontology can enhance the successful development of complex enterprise system; this is being achieved through knowledge sharing and the ease of communication between every entity in the domain. Through human semantic interaction…

Computers and Society · Computer Science 2014-01-13 Adeyinka K Akanbi

Amorphous solids form an enormous and underutilized class of materials. In order to drive the discovery of new useful amorphous materials further we need to achieve a closer convergence between computational and experimental methods. In…

Disordered Systems and Neural Networks · Physics 2024-11-19 Ata Madanchi , Emna Azek , Karim Zongo , Laurent K. Béland , Normand Mousseau , Lena Simine

Real-world applications are now processing big-data sets, often bottlenecked by the data movement between the compute units and the main memory. Near-memory computing (NMC), a modern data-centric computational paradigm, can alleviate these…

Hardware Architecture · Computer Science 2021-06-30 Stefano Corda , Madhurya Kumaraswamy , Ahsan Javed Awan , Roel Jordans , Akash Kumar , Henk Corporaal

Molecular representation learning plays a crucial role in various downstream tasks, such as molecular property prediction and drug design. To accurately represent molecules, Graph Neural Networks (GNNs) and Graph Transformers (GTs) have…

Machine Learning · Computer Science 2025-02-07 Jingjing Hu , Dan Guo , Zhan Si , Deguang Liu , Yunfeng Diao , Jing Zhang , Jinxing Zhou , Meng Wang

Existing multi-objective preference alignment methods for large language models (LLMs) face limitations: (1) the inability to effectively balance various preference dimensions, and (2) reliance on auxiliary reward/reference models…

Machine Learning · Computer Science 2025-06-10 Qi Liu , Jingqing Ruan , Hao Li , Haodong Zhao , Desheng Wang , Jiansong Chen , Wan Guanglu , Xunliang Cai , Zhi Zheng , Tong Xu