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Many computer vision algorithms depend on a variety of parameter choices and settings that are typically hand-tuned in the course of evaluating the algorithm. While such parameter tuning is often presented as being incidental to the…

Computer Vision and Pattern Recognition · Computer Science 2012-09-25 J. Bergstra , D. Yamins , D. D. Cox

The pseudo-marginal algorithm is a variant of the Metropolis--Hastings algorithm which samples asymptotically from a probability distribution when it is only possible to estimate unbiasedly an unnormalized version of its density.…

Computation · Statistics 2019-12-04 Sebastian M. Schmon , George Deligiannidis , Arnaud Doucet , Michael K. Pitt

The Probe-Particle Model combine theories designed for the simulation of scanning probe microscopy experiments, employing non-reactive, flexible tip apices to achieve sub-molecular resolution. In the article we present the latest version of…

Mesoscale and Nanoscale Physics · Physics 2024-07-02 Niko Oinonen , Aliaksandr V. Yakutovich , Aurelio Gallardo , Martin Ondracek , Prokop Hapala , Ondrej Krejci

Popular Hough Transform-based object detection approaches usually construct an appearance codebook by clustering local image features. However, how to choose appropriate values for the parameters used in the clustering step remains an open…

Computer Vision and Pattern Recognition · Computer Science 2016-03-29 Jianyu Tang , Hanzi Wang , Yan Yan

We advocate for a new paradigm of cosmological likelihood-based inference, leveraging recent developments in machine learning and its underlying technology, to accelerate Bayesian inference in high-dimensional settings. Specifically, we…

Cosmology and Nongalactic Astrophysics · Physics 2024-09-06 Davide Piras , Alicja Polanska , Alessio Spurio Mancini , Matthew A. Price , Jason D. McEwen

Hyperparameter Optimization (HPO) of Deep Learning-based models tends to be a compute resource intensive process as it usually requires to train the target model with many different hyperparameter configurations. We show that integrating…

Machine Learning · Computer Science 2023-11-30 Juan Pablo García Amboage , Eric Wulff , Maria Girone , Tomás F. Pena

To gain a comprehensive view of what the LHC tells us about physics beyond the Standard Model (BSM), it is crucial that different BSM-sensitive analyses can be combined. But in general, search analyses are not statistically orthogonal, so…

High Energy Physics - Phenomenology · Physics 2023-04-19 Jack Y. Araz , Andy Buckley , Benjamin Fuks , Humberto Reyes-Gonzalez , Wolfgang Waltenberger , Sophie L. Williamson , Jamie Yellen

Ensuring the reproducibility of physics results is one of the crucial challenges in high-energy physics (HEP). In this study, we develop a proof-of-concept system that uses large language models (LLMs) to extract analysis procedures from…

Data Analysis, Statistics and Probability · Physics 2026-04-17 Masahiko Saito , Tomoe Kishimoto , Junichi Tanaka

Molecular dynamics (MD) simulations are useful in obtaining thermodynamic and kinetic properties of bio-molecules but are limited by the timescale barrier, i.e., we may be unable to efficiently obtain properties because we need to run…

Chemical Physics · Physics 2017-08-23 Surl-Hee Ahn , Jay W. Grate , Eric F. Darve

Efficient high-performance libraries often expose multiple tunable parameters to provide highly optimized routines. These can range from simple loop unroll factors or vector sizes all the way to algorithmic changes, given that some…

Performance · Computer Science 2022-02-22 Marco Cianfriglia , Flavio Vella , Cedric Nugteren , Anton Lokhmotov , Grigori Fursin

To fully leverage the advantages of large-scale pre-trained language models (PLMs) on downstream tasks, it has become a ubiquitous adaptation paradigm to fine-tune the entire parameters of PLMs. However, this paradigm poses issues of…

Computation and Language · Computer Science 2023-05-09 Anchun Gui , Han Xiao

Molecular simulations are an important tool for research in physics, chemistry, and biology. The capabilities of simulations can be greatly expanded by providing access to advanced sampling methods and techniques that permit calculation of…

Bayesian Active Learning (BAL) is an efficient framework for learning the parameters of a model, in which input stimuli are selected to maximize the mutual information between the observations and the unknown parameters. However, the…

Quantitative Methods · Quantitative Biology 2022-12-01 Camille Gontier , Simone Carlo Surace , Igor Delvendahl , Martin Müller , Jean-Pascal Pfister

In recent years, disease mapping studies have become a routine application within geographical epidemiology and are typically analysed within a Bayesian hierarchical model formulation. A variety of model formulations for the latent level…

Methodology · Statistics 2016-01-07 Andrea Riebler , Sigrunn H. Sørbye , Daniel Simpson , Håvard Rue

Parallelization and External Memory (PEM) techniques have significantly enhanced the capabilities of search algorithms when solving large-scale problems. Previous research on PEM has primarily centered on unidirectional algorithms, with…

Artificial Intelligence · Computer Science 2025-01-06 Lior Siag , Shahaf S. Shperberg , Ariel Felner , Nathan R. Sturtevant

This paper introduces Sparklen, a statistical learning toolkit for Hawkes processes in Python, designed to bring together efficiency and ease of use. The purpose of this package is to provide the Python community with a complete suite of…

Methodology · Statistics 2025-03-31 Romain Edmond Lacoste

It is a common practice to exploit pyramidal feature representation to tackle the problem of scale variation in object instances. However, most of them still predict the objects in a certain range of scales based solely or mainly on a…

Computer Vision and Pattern Recognition · Computer Science 2020-12-10 Zehui Gong , Dong Li

We develop a model-based methodology for integrating gene-set information with an experimentally-derived gene list. The methodology uses a previously reported sampling model, but takes advantage of natural constraints in the…

Methodology · Statistics 2015-06-02 Zhishi Wang , Qiuling He , Bret Larget , Michael A. Newton

We consider posterior sampling in the very common Bayesian hierarchical model in which observed data depends on high-dimensional latent variables that, in turn, depend on relatively few hyperparameters. When the full conditional over the…

Computation · Statistics 2016-10-24 Richard A. Norton , J. Andres Christen , Colin Fox

High-dimensional variable selection, with many more covariates than observations, is widely documented in standard regression models, but there are still few tools to address it in non-linear mixed-effects models where data are collected…

Statistics Theory · Mathematics 2024-04-08 Marion Naveau , Guillaume Kon Kam King , Renaud Rincent , Laure Sansonnet , Maud Delattre