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We experimentally evaluate the practical state-of-the-art in graph bipartization (Odd Cycle Transversal), motivated by recent advances in near-term quantum computing hardware and the related embedding problems. We assemble a preprocessing…

Discrete Mathematics · Computer Science 2021-03-22 Timothy D. Goodrich , Eric Horton , Blair D. Sullivan

Graphlet counting is an important problem as it has numerous applications in several fields, including social network analysis, biological network analysis, transaction network analysis, etc. Most of the practical networks are dynamic. A…

Data Structures and Algorithms · Computer Science 2023-08-29 Hriday G , Pranav Saikiran Sista , Apurba Das

Bipartite Correlation clustering is the problem of generating a set of disjoint bi-cliques on a set of nodes while minimizing the symmetric difference to a bipartite input graph. The number or size of the output clusters is not constrained…

Data Structures and Algorithms · Computer Science 2010-12-15 Nir Ailon , Noa Avigdor-Elgrabli , Edo Liberty

In this paper we give fast distributed graph algorithms for detecting and listing small subgraphs, and for computing or approximating the girth. Our algorithms improve upon the state of the art by polynomial factors, and for girth, we…

Data Structures and Algorithms · Computer Science 2021-01-20 Keren Censor-Hillel , Orr Fischer , Tzlil Gonen , François Le Gall , Dean Leitersdorf , Rotem Oshman

In this paper a novel biclustering algorithm based on artificial intelligence (AI) is introduced. The method called EBIC aims to detect biologically meaningful, order-preserving patterns in complex data. The proposed algorithm is probably…

Machine Learning · Computer Science 2018-07-27 Patryk Orzechowski , Moshe Sipper , Xiuzhen Huang , Jason H. Moore

Extracting cohesive subgraphs from complex networks is a fundamental task in graph analytics and is essential for understanding biological, social, and web graphs. The edge-based $\gamma$-quasi-clique model offers a flexible alternative by…

Social and Information Networks · Computer Science 2026-01-22 Hongbo Xia , Shengxin Liu , Zhaoquan Gu

Counting the frequency of small subgraphs is a fundamental technique in network analysis across various domains, most notably in bioinformatics and social networks. The special case of triangle counting has received much attention. Getting…

Social and Information Networks · Computer Science 2016-11-01 Ali Pinar , C. Seshadhri , V. Vishal

We study the polyhedral properties of three problems of constructing an optimal complete bipartite subgraph (a biclique) in a bipartite graph. In the first problem we consider a balanced biclique with the same number of vertices in both…

Combinatorics · Mathematics 2018-02-16 Vladimir Bondarenko , Andrei Nikolaev , Dzhambolet Shovgenov

We study the Maximum Balanced Biclique (MBB) problem: Given a bipartite graph $G$ with $n$ vertices on each side, find a balanced biclique in $G$ with maximum size. We give a polynomial-time $\left(\frac{n}{\widetilde{\Omega}\left((\log…

Data Structures and Algorithms · Computer Science 2026-05-01 Pasin Manurangsi

Maximal Biclique Enumeration (MBE) holds critical importance in graph theory with applications extending across fields such as bioinformatics, social networks, and recommendation systems. However, its computational complexity presents…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-23 Chou-Ying Hsieh , Chia-Ming Chang , Po-Hsiu Cheng , Sy-Yen Kuo

We unify and extend previous bijections on plane quadrangulations to bipartite and quasibipartite plane maps. Starting from a bipartite plane map with a distinguished edge and two distinguished corners (in the same face or in two different…

Combinatorics · Mathematics 2018-12-21 Jérémie Bettinelli

Arclength continuation and branch switching are enormously successful algorithms for the computation of bifurcation diagrams. Nevertheless, their combination suffers from three significant disadvantages. The first is that they attempt to…

Numerical Analysis · Mathematics 2016-03-03 Patrick E. Farrell , Casper H. L. Beentjes , Ásgeir Birkisson

This paper studies the problem of counting homomorphisms from a bipartite source graph to a bipartite target graph. An exact formula is first derived for the number of homomorphisms from a complete bipartite graph into a general bipartite…

Combinatorics · Mathematics 2025-08-21 Igal Sason

The biclique cover number (resp. biclique partition number) of a graph $G$, $\mathrm{bc}(G$) (resp. $\mathrm{bp}(G)$), is the least number of biclique (complete bipartite) subgraphs that are needed to cover (resp. partition) the edges of…

Combinatorics · Mathematics 2014-06-24 Trevor Pinto

We relate two complexity notions of bipartite graphs: the minimal weight biclique covering number $\mathrm{Cov}(G)$ and the minimal rectifier network size $\mathrm{Rect}(G)$ of a bipartite graph $G$. We show that there exist graphs with…

Formal Languages and Automata Theory · Computer Science 2014-06-03 Szabolcs Iván , Ádám Dániel Lelkes , Judit Nagy-György , Balázs Szörényi , György Turán

We design new polynomial-time algorithms for recovering planted cliques in the semi-random graph model introduced by Feige and Kilian 2001. The previous best algorithms for this model succeed if the planted clique has size at least…

Data Structures and Algorithms · Computer Science 2023-06-07 Rares-Darius Buhai , Pravesh K. Kothari , David Steurer

Given an undirected graph $G(V, E)$, it is well known that partitioning a graph $G$ into $q$ connected subgraphs of equal or specificed sizes is in general NP-hard problem. On the other hand, it has been shown that the q-partition problem…

Data Structures and Algorithms · Computer Science 2018-10-30 Ngoc-Tu Nguyen , Zhi-Li Zhang

We show that the problem of deciding whether the vertex set of a graph can be covered with at most two bicliques is in NP$\cap$coNP. We thus almost determine the computational complexity of a problem whose status has remained open for quite…

Computational Complexity · Computer Science 2015-03-19 M. A. Shalu , S. Vijayakumar

Quantum annealers offer an efficient way to compute high quality solutions of NP-hard problems when expressed in a QUBO (quadratic unconstrained binary optimization) or an Ising form. This is done by mapping a problem onto the physical…

Quantum Physics · Physics 2022-04-26 Elijah Pelofske , Georg Hahn , Hristo N. Djidjev

Bipartite graphs characterize relationships between two different sets of entities, like actor-movie, user-item, and author-paper. The butterfly, a 4-vertices 4-edges (2,2)-biclique, is the simplest cohesive motif in a bipartite graph and…

Data Structures and Algorithms · Computer Science 2026-04-21 Xinwei Cai , Xiangyu Ke , Kai Wang , Lu Chen , Tianming Zhang , Qing Liu , Yunjun Gao