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Group testing can save testing resources in the context of the ongoing COVID-19 pandemic. In group testing, we are given $n$ samples, one per individual, and arrange them into $m < n$ pooled samples, where each pool is obtained by mixing a…

Applications · Statistics 2023-11-03 Ritesh Goenka , Shu-Jie Cao , Chau-Wai Wong , Ajit Rajwade , Dror Baron

Human behaviour strongly influences the spread of infectious diseases: understanding the interplay between epidemic dynamics and adaptive behaviours is essential to improve response strategies to epidemics, with the goal of containing the…

Physics and Society · Physics 2024-08-21 Marco Mancastroppa , Alessandro Vezzani , Vittoria Colizza , Raffaella Burioni

Network--based epidemic models that account for heterogeneous contact patterns are extensively used to predict and control the diffusion of infectious diseases. We use census and survey data to reconstruct a geo--referenced and…

Social and Information Networks · Computer Science 2026-05-19 Alessandro Celestini , Francesca Colaiori , Stefano Guarino , Enrico Mastrostefano , Lena Rebecca Zastrow

Network-based epidemic models have been extensively employed to understand the spread of infectious diseases, but have generally overlooked the fact that most realistic networks are dynamical rather than static. In this paper, we study a…

Physics and Society · Physics 2019-02-19 Xiao-Long Peng , Ze-Qiong Zhang , Junyuan Yang , Zhen Jin

Group testing can help maintain a widespread testing program using fewer resources amid a pandemic. In group testing, we are given $n$ samples, one per individual. These samples are arranged into $m < n$ pooled samples, where each pool is…

Information Theory · Computer Science 2022-01-20 Ritesh Goenka , Shu-Jie Cao , Chau-Wai Wong , Ajit Rajwade , Dror Baron

School environments are thought to play an important role in the community spread of airborne infections (e.g., influenza) because of the high mixing rates of school children. The closure of schools has therefore been proposed as efficient…

Quantitative Methods · Quantitative Biology 2015-01-21 Valerio Gemmetto , Alain Barrat , Ciro Cattuto

The possibility to analyze, quantify and forecast epidemic outbreaks is fundamental when devising effective disease containment strategies. Policy makers are faced with the intricate task of drafting realistically implementable policies…

Social and Information Networks · Computer Science 2015-04-07 Antonio Lima , Veljko Pejovic , Luca Rossi , Mirco Musolesi , Marta Gonzalez

After the introduction of drastic containment measures aimed at stopping the epidemic contagion from SARS-CoV2, many governments have adopted a strategy based on a periodic relaxation of such measures in the face of a severe economic crisis…

Populations and Evolution · Quantitative Biology 2021-06-10 Giacomo Albi , Lorenzo Pareschi , Mattia Zanella

Effective contact tracing is crucial to contain epidemic spreading without disrupting societal activities especially in the present time of coexistence with a pandemic outbreak. Large gatherings play a key role, potentially favouring…

Physics and Society · Physics 2022-05-18 Marco Mancastroppa , Andrea Guizzo , Claudio Castellano , Alessandro Vezzani , Raffaella Burioni

We study the critical effect of quarantine on the propagation of epidemics on an adaptive network of social contacts. For this purpose, we analyze the susceptible-infected-recovered (SIR) model in the presence of quarantine, where…

Physics and Society · Physics 2015-05-20 C. Lagorio , M. Dickison , F. Vazquez , L. A. Braunstein , P. A. Macri , M. V. Migueles , S. Havlin , H. E. Stanley

The impact of mitigation or control measures on an epidemics can be estimated by fitting the parameters of a compartmental model to empirical data, and running the model forward with modified parameters that account for a specific measure.…

Populations and Evolution · Quantitative Biology 2020-04-10 Jacopo Grilli , Matteo Marsili , Guido Sanguinetti

We combine infectious disease transmission and the non-pharmaceutical intervention (NPI) response to disease incidence into one closed model consisting of two coupled delay differential equations for the incidence rate and the…

Quantitative Methods · Quantitative Biology 2021-02-24 Kristoffer Rypdal

Sexually transmitted infections (STIs) continue to present a complex and costly challenge to public health programs. The preferences and social dynamics of a population can have a large impact on the course of an outbreak as well as the…

Populations and Evolution · Quantitative Biology 2015-06-30 Michael A. L. Hayashi , Marisa C. Eisenberg

The spread of a contagious disease clearly depends on when infected individuals come into contact with susceptible ones. Such effects, however, have remained largely unexplored in the study of epidemic outbreaks. In particular, it remains…

Contact tracing and quarantine are well established non-pharmaceutical epidemic control tools. The paper aims to clarify the impact of these measures in COVID-19 epidemic. A new deterministic model is introduced (SEIRQ: susceptible,…

Populations and Evolution · Quantitative Biology 2020-06-01 Tomasz Piasecki , Piotr B. Mucha , Magdalena Rosińska

This paper is based on the observation that, during Covid-19 epidemic, the choice of which individuals should be tested has an important impact on the effectiveness of selective confinement measures. This decision problem is closely related…

Physics and Society · Physics 2020-12-24 Matthias Pezzutto , Nicolas Bono Rossello , Luca Schenato , Emanuele Garone

We first propose a quantitative approach to detect high risk outbreaks of independent and coinfective SIR dynamics on three empirical networks: a school, a conference and a hospital contact network. This measurement is based on the k-means…

Populations and Evolution · Quantitative Biology 2021-09-15 Sina Sajjadi , Mohammad Reza Ejtehadi , Fakhteh Ghanbarnejad

The Covid-19 epidemic of the novel coronavirus (severe acute respiratory syndrome SARS - CoV-2) has been spreading around the world. While different containment policies using non-pharmaceutical interventions have been applied, their…

Populations and Evolution · Quantitative Biology 2020-10-28 Antonio Bianconi , Augusto Marcelli , Gaetano Campi , Andrea Perali

Automated contact tracing is a key solution to control the spread of airborne transmittable diseases: it traces contacts among individuals in order to alert people about their potential risk of being infected. The current SARS-CoV-2…

Cryptography and Security · Computer Science 2020-11-03 Marco Casagrande , Mauro Conti , Eleonora Losiouk

This paper considers a stochastic SIR (susceptible$\to$infective$\to$removed) epidemic model in which individuals may make infectious contacts in two ways, both within `households' (which for ease of exposition are assumed to have equal…

Probability · Mathematics 2015-03-13 Frank Ball , David Sirl , Pieter Trapman