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In this paper, we introduce an ASEP-like transport model for bidirectional motion of particles on a multi-lane lattice. The model is motivated by {\em in vivo} experiments on organelle motility along a microtubule (MT), consisting of…

Cellular Automata and Lattice Gases · Physics 2015-05-28 Congping Lin , Gero Steinberg , Peter Ashwin

Aligning self-propelled particles undergo a nonequilibrium flocking transition from apolar to polar phases as their interactions become stronger. We propose a thermodynamically consistent lattice model, in which the internal state of the…

Statistical Mechanics · Physics 2025-08-08 Karel Proesmans , Gianmaria Falasco , Atul Tanaji Mohite , Massimiliano Esposito , Étienne Fodor

We study an agent-based model of self-propelled particles with a velocity-dependent alignment rule. This interaction is orientation weighted and acts along the line connecting neighboring particles. Tuning the alignment strength produces…

Soft Condensed Matter · Physics 2026-05-19 Bohdan Dobosh , Alexander Yakimenko

Natural phenomena frequently involve a very large number of interacting molecules moving in confined regions of space. Cellular transport by motor proteins is an example of such collective behavior. We derive a deterministic compartmental…

Subcellular Processes · Quantitative Biology 2017-11-01 Yoram Zarai , Michael Margaliot , Anatoly B. Kolomeisky

The transport equation of active motion is generalised to consider time-fractional dynamics for describing the anomalous diffusion of self-propelled particles observed in many different systems. In the present study, we consider an…

Statistical Mechanics · Physics 2023-10-27 Francisco J. Sevilla , Guillermo Chacón-Acosta , Trifce Sandev

Spontaneous segregation of run-and-tumble particles with different velocities in microchannels is investigated by numerical simulations. Self-propelled particles are known to accumulate in the proximity of walls. Here we show how fast…

Soft Condensed Matter · Physics 2014-09-05 Andrea Costanzo , Jens Elgeti , Thorsten Auth , Gerhard Gompper , Marisol Ripoll

We study single-file diffusion on a one-dimensional lattice with a random fractal distribution of hopping rates. For finite lattices, this problem shows three clearly different regimes, namely, nearly independent particles, highly…

Statistical Mechanics · Physics 2017-03-08 L. Padilla , H. O. Mártin , J. L. Iguain

We present and analyze mechanisms for the patterned deposition of particles in a spatio-temporally driven lattice. The working principle is based on the breaking of the spatio-temporal translation symmetry, which is responsible for the…

Chaotic Dynamics · Physics 2013-11-06 Benno Liebchen , Christoph Petri , Florian Lenz , Peter Schmelcher

We study flocking in one dimension, introducing a lattice model in which particles can move either left or right. We find that the model exhibits a continuous nonequilibrium phase transition from a condensed phase, in which a single `flock'…

Statistical Mechanics · Physics 2009-10-31 O. J. O'Loan , M. R. Evans

A continuum model for a population of self-propelled particles interacting through nematic alignment is derived from an individual-based model. The methodology consists of introducing a hydrodynamic scaling of the corresponding mean-field…

Analysis of PDEs · Mathematics 2015-09-11 Pierre Degond , Angelika Manhart , Hui Yu

Via computer simulations we study kinetics of pattern formation in a two-dimensional active matter system. Self-propulsion in our model is incorporated via the Vicsek-like activity, i.e., particles have the tendency of aligning their…

Soft Condensed Matter · Physics 2020-08-26 Saikat Chakraborty , Subir K. Das

A dynamical system is considered such that, in this system, particles move on a toroidal lattice of the dimension $N_1\times N_2$ according to a version of the rule of particle movement in Biham--Middleton--Levine traffic model. Particles…

Optimization and Control · Mathematics 2023-11-30 Marina V. Yashina , Alexander G. Tatashev

We study, in two space dimensions, the large-scale properties of collections of constant-speed polar point particles interacting locally by nematic alignment in the presence of noise. This minimal approach to self-propelled rods allows one…

Soft Condensed Matter · Physics 2015-05-14 F. Ginelli , F. Peruani , M. Baer , H. Chate

We consider binary suspension of rough, circular particles in two dimensions under athermal conditions. The mean density of the system is kept constant. The suspension is subject to a time-independent external drive in response to which one…

Soft Condensed Matter · Physics 2021-03-26 Md. Samsuzzaman , A. Sayeed , Arnab Saha

We consider a tracer particle on a lattice in the presence of immobile obstacles. Starting from equilibrium, a force pulling on the particle is switched on, driving the system to a new stationary state. We solve for the complete transient…

Soft Condensed Matter · Physics 2017-01-04 Sebastian Leitmann , Thomas Franosch

We present an individual-based model describing disk-like self-propelled particles moving inside parallel planes. The disk directions of motion follow alignment rules inside each layer. Additionally, the disks are subject to interactions…

Adaptation and Self-Organizing Systems · Physics 2015-02-23 Pierre Degond , Laurent Navoret

We study the effect of disorder on the particle density evolution in a classical Hamiltonian driven lattice setup. If the disorder is localized within a finite sub-domain of the lattice, the emergence of strong tails in the density…

Chaotic Dynamics · Physics 2016-09-21 Thomas Wulf , Alexander Okupnik , Peter Schmelcher

We use a recently developed lattice model to study the percolation of particles of different sizes and shapes in the presence of a polymer matrix. The polymer is modeled as an infinitely long semiflexible chain. We study the effects of the…

Soft Condensed Matter · Physics 2015-06-25 Andrea Corsi , P. D. Gujrati

We investigate dynamics of deformable self-propelled particles with a repulsive interaction whose magnitude depends on the relative direction of elongation of a pair of particles. A collective motion of the particles appears in two…

Soft Condensed Matter · Physics 2015-05-27 Yu Itino , Takahiro Ohkuma , Takao Ohta

Intracellular transport processes driven by molecular motors can be described by stochastic lattice models of self-driven particles. Here we focus on bidirectional transport models excluding the exchange of particles on the same track. We…

Biological Physics · Physics 2015-05-27 M. Ebbinghaus , C. Appert-Rolland , L. Santen