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A primary challenge in metagenomics is reconstructing individual microbial genomes from the mixture of short fragments created by sequencing. Recent work leverages the sparsity of the assembly graph to find $r$-dominating sets which enable…

Data Structures and Algorithms · Computer Science 2023-01-24 Yosuke Mizutani , Annie Staker , Blair D. Sullivan

The Directed Steiner Network (DSN) problem takes as input a directed edge-weighted graph $G=(V,E)$ and a set $\mathcal{D}\subseteq V\times V$ of $k$ demand pairs. The aim is to compute the cheapest network $N\subseteq G$ for which there is…

Data Structures and Algorithms · Computer Science 2022-04-08 Rajesh Chitnis , Andreas Emil Feldmann , Pasin Manurangsi

Given a set of objects with durations (jobs) that cover a base region, can we schedule the jobs to maximize the duration the original region remains covered? We call this problem the sensor cover problem. This problem arises in the context…

Data Structures and Algorithms · Computer Science 2007-05-23 Adam L. Buchsbaum , Alon Efrat , Shaili Jain , Suresh Venkatasubramanian , Ke Yi

Given a directed graph G and an integer k >= 1, a k-transitive-closure-spanner (k-TCspanner) of G is a directed graph H that has (1) the same transitive-closure as G and (2) diameter at most k. In some applications, the shortcut paths added…

Data Structures and Algorithms · Computer Science 2010-11-30 Piotr Berman , Arnab Bhattacharyya , Elena Grigorescu , Sofya Raskhodnikova , David Woodruff , Grigory Yaroslavtsev

Target control of directed networks, which aims to control only a target subset instead of the entire set of nodes in large natural and technological networks, is an outstanding challenge faced in various real world applications. We address…

Systems and Control · Computer Science 2018-11-30 Guoqi Li , Xumin Chen , Pei Tang , Gaoxi Xiao , Changyun Wen , Luping Shi

Spanners for metric spaces have been extensively studied, both in general metrics and in restricted classes, perhaps most notably in low-dimensional Euclidean spaces -- due to their numerous applications. Euclidean spanners can be viewed as…

Data Structures and Algorithms · Computer Science 2022-06-03 Omri Kahalon , Hung Le , Lazar Milenkovic , Shay Solomon

Scheduling control problems for a family of unitary networks under heavy traffic with general interarrival and service times, probabilistic routing and an infinite horizon discounted linear holding cost are studied. Diffusion control…

Probability · Mathematics 2012-05-07 Amarjit Budhiraja , Arka P. Ghosh

Insect flight is a strongly nonlinear and actuated dynamical system. As such, strategies for understanding its control have typically relied on either model-based methods or linearizations thereof. Here we develop a framework that combines…

Quantitative Methods · Quantitative Biology 2023-01-11 Olivia Zahn , Jorge Bustamante , Callin Switzer , Thomas Daniel , J. Nathan Kutz

Convolutional Neural Networks (CNNs) compression is crucial to deploying these models in edge devices with limited resources. Existing channel pruning algorithms for CNNs have achieved plenty of success on complex models. They approach the…

Computer Vision and Pattern Recognition · Computer Science 2022-09-08 Alireza Ganjdanesh , Shangqian Gao , Heng Huang

In the semi-supervised setting where labeled data are largely limited, it remains to be a big challenge for message passing based graph neural networks (GNNs) to learn feature representations for the nodes with the same class label that is…

Machine Learning · Computer Science 2023-05-09 Acong Zhang , Ping Li , Guanrong Chen

Expanders are powerful algorithmic structures with two key properties: they are a) routable: for any multi-commodity flow unit demand, there exists a routing with low congestion over short paths, where a demand is unit if the amount of…

Data Structures and Algorithms · Computer Science 2025-07-18 Bernhard Haeupler , Antti Roeyskoe

This dissertation is a study on the design and analysis of novel, optimal routing and rate control algorithms in wireless, mobile communication networks. Congestion control and routing algorithms upto now have been designed and optimized…

Networking and Internet Architecture · Computer Science 2012-01-20 Jung Ryu

A $t$-spanner of an undirected $n$-vertex graph $G$ is a sparse subgraph $H$ of $G$ that preserves all pairwise distances between its vertices to within multiplicative factor $t$, also called the \emph{stretch}. We investigate the problem…

Data Structures and Algorithms · Computer Science 2026-01-29 Julia Chuzhoy , Merav Parter

Carrier-grade networks comprise several layers where different protocols coexist. Nowadays, most of these networks have different control planes to manage routing on different layers, leading to a suboptimal use of the network resources and…

Networking and Internet Architecture · Computer Science 2016-11-17 Mohamed Lamine Lamali , Nasreddine Fergani , Johanne Cohen , Hélia Pouyllau

Map matching is a common task when analysing GPS tracks, such as vehicle trajectories. The goal is to match a recorded noisy polygonal curve to a path on the map, usually represented as a geometric graph. The Fr\'echet distance is a…

Computational Geometry · Computer Science 2024-07-30 Kevin Buchin , Maike Buchin , Joachim Gudmundsson , Aleksandr Popov , Sampson Wong

In the Minimum Clique Routing Problem on Cycles \textsc{MCRPC} we are given a cycle together with a set of demands (weighted origin-destination pairs) and the goal is to route all the pairs minimizing the maximum weighted clique of the…

Data Structures and Algorithms · Computer Science 2023-11-17 Mariana Escalante , Martín Matamala , Iván Rapaport , Paola Tolomei , Luis Miguel Torres

The Stacker Crane Problem (SCP) is a variant of the Traveling Salesman Problem. In SCP, pairs of pickup and delivery points are designated on a graph, and a crane must visit these points to move objects from each pickup location to its…

Data Structures and Algorithms · Computer Science 2025-09-18 Yike Chen , Ke Shi , Chao Xu

Consider a setting where possibly sensitive information sent over a path in a network is visible to every {neighbor} of the path, i.e., every neighbor of some node on the path, thus including the nodes on the path itself. The exposure of a…

Data Structures and Algorithms · Computer Science 2012-12-27 Shiri Chechik , M. P. Johnson , Merav Parter , David Peleg

The cost-distance Steiner tree problem seeks a Steiner tree that minimizes the total congestion cost plus the weighted sum of source-sink delays. This problem arises as a subroutine in timing-constrained global routing with a linear delay…

Data Structures and Algorithms · Computer Science 2025-03-07 Stephan Held , Edgar Perner

Segment Routing is a recent network technology that helps optimizing network throughput by providing finer control over the routing paths. Instead of routing directly from a source to a target, packets are routed via intermediate waypoints.…

Computational Complexity · Computer Science 2025-01-08 Cristina Bazgan , Morgan Chopin , André Nichterlein , Camille Richer