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A fundamental tool in topological data analysis is persistent homology, which allows extraction of information from complex datasets in a robust way. Persistent homology assigns a module over a principal ideal domain to a one-parameter…

Algebraic Topology · Mathematics 2019-06-19 Heather A. Harrington , Nina Otter , Hal Schenck , Ulrike Tillmann

The goal of this note is to define biparametric persistence diagrams for smooth generic mappings $h=(f,g):M\to V\cong \mathbb{R}^2$ for smooth compact manifold $M$. Existing approaches to multivariate persistence are mostly centered on the…

Algebraic Topology · Mathematics 2021-10-20 Mishal Assif P K , Yuliy Baryshnikov

We introduce a consistent estimator for the homology (an algebraic structure representing connected components and cycles) of level sets of both density and regression functions. Our method is based on kernel estimation. We apply this…

Statistics Theory · Mathematics 2016-09-30 Omer Bobrowski , Sayan Mukherjee , Jonathan E. Taylor

Persistence has proved to be a valuable tool to analyze real world data robustly. Several approaches to persistence have been attempted over time, some topological in flavor, based on the vector space-valued homology functor, other…

Algebraic Topology · Mathematics 2019-05-23 Mattia G. Bergomi , Pietro Vertechi

We enhance the approximation capabilities of algebraic polynomials by composing them with homeomorphisms. This composition yields families of functions that remain dense in the space of continuous functions, while enabling more accurate…

Numerical Analysis · Mathematics 2025-12-17 Álvaro Fernández Corral , Yahya Saleh

We study the information content of summary statistics built from the multi-scale topology of large-scale structures on primordial non-Gaussianity of the local and equilateral type. We use halo catalogs generated from numerical N-body…

Cosmology and Nongalactic Astrophysics · Physics 2022-10-05 Matteo Biagetti , Juan Calles , Lina Castiblanco , Alex Cole , Jorge Noreña

A suitable feature representation that can both preserve the data intrinsic information and reduce data complexity and dimensionality is key to the performance of machine learning models. Deeply rooted in algebraic topology, persistent…

Algebraic Topology · Mathematics 2018-11-02 Chi Seng Pun , Kelin Xia , Si Xian Lee

The theory of multidimensional persistence captures the topology of a multifiltration -- a multiparameter family of increasing spaces. Multifiltrations arise naturally in the topological analysis of scientific data. In this paper, we give a…

Computational Geometry · Computer Science 2010-11-22 Gunnar Carlsson , Gurjeet Singh , Afra Zomorodian

A method for extracting multiscale geometric features from a data cloud is proposed and analyzed. The basic idea is to map each pair of data points into a real-valued feature function defined on $[0,1]$. The construction of these feature…

Statistics Theory · Mathematics 2019-12-16 Gabriel Chandler , Wolfgang Polonik

Given a real-valued function $f$ defined over a manifold $M$ embedded in $\mathbb{R}^d$, we are interested in recovering structural information about $f$ from the sole information of its values on a finite sample $P$. Existing methods…

Computational Geometry · Computer Science 2015-04-08 Mickaël Buchet , Frédéric Chazal , Tamal K. Dey , Fengtao Fan , Steve Y. Oudot , Yusu Wang

The paper deals with the comparison of the Gompertz function and the logistic function. We show that the Gompertz function can be approximated with high accuracy by a sum of three logistic functions (multilogistic function). Two of them are…

Statistics Theory · Mathematics 2024-05-24 Grzegorz Rzadkowski

Persistence homology is a tool used to measure topological features that are present in data sets and functions. Persistence pairs births and deaths of these features as we iterate through the sublevel sets of the data or function of…

Computational Geometry · Computer Science 2010-02-10 Brittany Terese Fasy

In persistent homology analysis, interval modules play a central role in describing the birth and death of topological features across a filtration. In this work, we extend this setting, and propose the use of bipath persistent homology,…

Algebraic Topology · Mathematics 2024-04-04 Toshitaka Aoki , Emerson G. Escolar , Shunsuke Tada

Spatial transcriptomics studies are becoming increasingly large and commonplace, necessitating simultaneous analysis of a large number of spatially resolved variables. Correspondingly, a diverse range of methodologies have been proposed to…

Quantitative Methods · Quantitative Biology 2025-09-09 James Boyle , Gregory Hamm , Eleanor Williams , Robin JG Hartman , Magnus Soderburg , Ian Henry , Michael Casey

We consider the problem of graph-matching on a network of 3D shapes with uncertainty quantification. We assume that the pairwise shape correspondences are efficiently represented as \emph{functional maps}, that match real-valued functions…

Computer Vision and Pattern Recognition · Computer Science 2023-01-05 Faria Huq , Adrish Dey , Sahra Yusuf , Dena Bazazian , Tolga Birdal , Nina Miolane

In this paper, we employ the persistent homology (PH) technique to examine the topological properties of fractional Gaussian noise (fGn). We develop the weighted natural visibility graph algorithm, and the associated simplicial complexes…

Data Analysis, Statistics and Probability · Physics 2022-06-17 H. Masoomy , B. Askari , M. N. Najafi , S. M. S. Movahed

Single-parameter persistent homology, a key tool in topological data analysis, has been widely applied to data problems along with statistical techniques that quantify the significance of the results. In contrast, statistical techniques for…

Algebraic Topology · Mathematics 2020-12-14 Matthew Wright , Xiaojun Zheng

Recently, persistent homology has had tremendous success in biomolecular data analysis. It works by examining the topological relationship or connectivity of a group of atoms in a molecule at a variety of scales, then rendering a family of…

Biomolecules · Quantitative Biology 2019-03-27 David Bramer , Guo-Wei Wei

Let $X$ be a separable real Hilbert space. We show that for every Lipschitz function $f:X\rightarrow\mathbb{R}$, and for every $\epsilon>0$, there exists a Lipschitz, real analytic function $g:X\rightarrow\mathbb{R}$ such that…

Functional Analysis · Mathematics 2015-03-23 D. Azagra , R. Fry , L. Keener

Given a finite number of samples of a continuous set-valued function F, mapping an interval to non-empty compact subsets of $\mathbb{R}^d$, $F: [a,b] \to K(\mathbb{R}^d)$, we discuss the problem of computing good approximations of F. We…

Numerical Analysis · Mathematics 2025-01-27 Nira Dyn , David Levin
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