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We present DynaRAG, a retrieval-augmented generation (RAG) framework designed to handle both static and time-sensitive information needs through dynamic knowledge integration. Unlike traditional RAG pipelines that rely solely on static…

Computation and Language · Computer Science 2026-03-20 Penghao Liang , Mengwei Yuan , Jianan Liu , Jing Yang , Xianyou Li , Weiran Yan , Yichao Wu

Current general-purpose large language models (LLMs) commonly exhibit knowledge hallucination and insufficient domain-specific adaptability in domain-specific tasks, limiting their effectiveness in specialized question answering scenarios.…

Information Retrieval · Computer Science 2025-09-16 Mengzheng Yang , Yanfei Ren , David Osei Opoku , Ruochang Li , Peng Ren , Chunxiao Xing

Retrieval-Augmented Generation (RAG) systems enhance large language models (LLMs) by integrating external knowledge sources, enabling more accurate and contextually relevant responses tailored to user needs. However, existing RAG systems…

Information Retrieval · Computer Science 2025-04-29 Zirui Guo , Lianghao Xia , Yanhua Yu , Tu Ao , Chao Huang

Pathology image segmentation is crucial in computational pathology for analyzing histological features relevant to cancer diagnosis and prognosis. However, current methods face major challenges in clinical applications due to limited…

Computer Vision and Pattern Recognition · Computer Science 2025-08-20 Zhixuan Chen , Junlin Hou , Liqi Lin , Yihui Wang , Yequan Bie , Xi Wang , Yanning Zhou , Ronald Cheong Kin Chan , Hao Chen

Recent advancements in QA with LLM, like GPT-4, have shown limitations in handling complex multi-hop queries. We propose AT-RAG, a novel multistep RAG incorporating topic modeling for efficient document retrieval and reasoning. Using…

Computation and Language · Computer Science 2024-10-18 Mohammad Reza Rezaei , Maziar Hafezi , Amit Satpathy , Lovell Hodge , Ebrahim Pourjafari

Biological systems are governed by structured molecular interactions, where pathways, regulatory circuits, and functional gene relationships shape cellular behavior and disease progression. Much of this knowledge is naturally represented as…

Machine Learning · Computer Science 2026-05-26 Yuwei Xue , Sakib Mostafa , James Zou , Joseph Liao , Maximilian Diehn , Ash A. Alizadeh , Lei Xing , Md. Tauhidul Islam

Graph-RAG improves LLM reasoning using structured knowledge, yet conventional designs rely on a centralized knowledge graph. In distributed and access-restricted settings (e.g., hospitals or multinational organizations), retrieval must…

Artificial Intelligence · Computer Science 2026-02-10 Longkun Li , Yuanben Zou , Jinghan Wu , Yuqing Wen , Jing Li , Hangwei Qian , Ivor Tsang

Computational pathology, integrating computational methods and digital imaging, has shown to be effective in advancing disease diagnosis and prognosis. In recent years, the development of machine learning and deep learning has greatly…

Image and Video Processing · Electrical Eng. & Systems 2025-02-25 Jiamu Wang , Chang-Su Kim , Jin Tae Kwak

While high-resolution pathology images lend themselves well to `data hungry' deep learning algorithms, obtaining exhaustive annotations on these images is a major challenge. In this paper, we propose a self-supervised CNN approach to…

Computer Vision and Pattern Recognition · Computer Science 2020-08-14 Navid Alemi Koohbanani , Balagopal Unnikrishnan , Syed Ali Khurram , Pavitra Krishnaswamy , Nasir Rajpoot

Microscopic examination of slides prepared from tissue samples is the primary tool for detecting and classifying cancerous lesions, a process that is time-consuming and requires the expertise of experienced pathologists. Recent advances in…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Saba Fatema , Brighton Nuwagira , Sayoni Chakraborty , Reyhan Gedik , Baris Coskunuzer

In order to thrive in hostile and ever-changing natural environments, mammalian brains evolved to store large amounts of knowledge about the world and continually integrate new information while avoiding catastrophic forgetting. Despite the…

Computation and Language · Computer Science 2025-01-15 Bernal Jiménez Gutiérrez , Yiheng Shu , Yu Gu , Michihiro Yasunaga , Yu Su

Retrieval-augmented generation (RAG) enables large language models (LLMs) to dynamically access external information, which is powerful for answering questions over previously unseen documents. Nonetheless, they struggle with high-level…

Artificial Intelligence · Computer Science 2026-04-21 Chi-Hsiang Hsiao , Yi-Cheng Wang , Tzung-Sheng Lin , Yi-Ren Yeh , Chu-Song Chen

Advances in entity-graph based analysis of histopathology images have brought in a new paradigm to describe tissue composition, and learn the tissue structure-to-function relationship. Entity-graphs offer flexible and scalable…

Image and Video Processing · Electrical Eng. & Systems 2021-07-22 Guillaume Jaume , Pushpak Pati , Valentin Anklin , Antonio Foncubierta , Maria Gabrani

Retrieval-augmented generation (RAG) greatly enhances large language models (LLMs) performance in knowledge-intensive tasks. However, naive RAG methods struggle with multi-hop question answering due to their limited capacity to capture…

Information Retrieval · Computer Science 2025-11-19 Junchen Li , Rongzheng Wang , Yihong Huang , Qizhi Chen , Jiasheng Zhang , Shuang Liang

With the rapid development of Large Language Models (LLMs), Retrieval-Augmented Generation (RAG) has become a predominant method in the field of professional knowledge-based question answering. Presently, major foundation model companies…

Artificial Intelligence · Computer Science 2024-01-24 Demiao Lin

Pathological structures in medical images are typically deviations from the expected anatomy of a patient. While clinicians consider this interplay between anatomy and pathology, recent deep learning algorithms specialize in recognizing…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Alexander Jaus , Constantin Seibold , Simon Reiß , Lukas Heine , Anton Schily , Moon Kim , Fin Hendrik Bahnsen , Ken Herrmann , Rainer Stiefelhagen , Jens Kleesiek

Current Retrieval-Augmented Generation (RAG) systems primarily operate on unimodal textual data, limiting their effectiveness on unstructured multimodal documents. Such documents often combine text, images, tables, equations, and graphs,…

Machine Learning · Computer Science 2025-10-17 Rashmi R , Vidyadhar Upadhya

Document Visual Question Answering (Document VQA) must cope with documents that span dozens of pages, yet leading systems still concatenate every page or rely on very large vision-language models, both of which are memory-hungry.…

Computer Vision and Pattern Recognition · Computer Science 2025-08-29 Eric López , Artemis Llabrés , Ernest Valveny

Graph-based Retrieval-Augmented Generation (Graph-RAG) enhances large language models (LLMs) by structuring retrieval over an external corpus. However, existing approaches typically assume a static corpus, requiring expensive full-graph…

Information Retrieval · Computer Science 2025-07-08 Fangyuan Zhang , Zhengjun Huang , Yingli Zhou , Qintian Guo , Zhixun Li , Wensheng Luo , Di Jiang , Yixiang Fang , Xiaofang Zhou

Cancer diagnosis, prognosis, and therapeutic response predictions are based on morphological information from histology slides and molecular profiles from genomic data. However, most deep learning-based objective outcome prediction and…

Computer Vision and Pattern Recognition · Computer Science 2020-09-04 Richard J. Chen , Ming Y. Lu , Jingwen Wang , Drew F. K. Williamson , Scott J. Rodig , Neal I. Lindeman , Faisal Mahmood