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Related papers: IDCIA: Immunocytochemistry Dataset for Cellular Im…

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Computer-assisted minimally invasive surgery has great potential in benefiting modern operating theatres. The video data streamed from the endoscope provides rich information to support context-awareness for next-generation intelligent…

Computer Vision and Pattern Recognition · Computer Science 2022-08-04 Ziyi Wang , Bo Lu , Yonghao Long , Fangxun Zhong , Tak-Hong Cheung , Qi Dou , Yunhui Liu

Prior skin image datasets have not addressed patient-level information obtained from multiple skin lesions from the same patient. Though artificial intelligence classification algorithms have achieved expert-level performance in controlled…

Purpose: Machine learning models can only be reliably evaluated if training, validation, and test data splits are representative and not affected by the absence of classes of interest. Surgical workflow and instrument recognition tasks are…

Machine Learning · Computer Science 2024-02-06 Georgii Kostiuchik , Lalith Sharan , Benedikt Mayer , Ivo Wolf , Bernhard Preim , Sandy Engelhardt

In digital pathology, cell detection and classification are often prerequisites to quantify cell abundance and explore tissue spatial heterogeneity. However, these tasks are particularly challenging for multiplex immunohistochemistry (mIHC)…

Image and Video Processing · Electrical Eng. & Systems 2019-08-05 Yeman Brhane Hagos , Priya Lakshmi Narayanan , Ayse U. Akarca , Teresa Marafioti , Yinyin Yuan

Semantic segmentation of microscopic cell images using deep learning is an important technique, however, it requires a large number of images and ground truth labels for training. To address the above problem, we consider an efficient…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Sota Kato , Kazuhiro Hotta

The field of Machine Learning, a subset of Artificial Intelligence, has led to remarkable advancements in many areas, including medicine. Machine Learning algorithms require large datasets to train computer models successfully. Although…

Image and Video Processing · Electrical Eng. & Systems 2019-12-30 Andrew A. Borkowski , Marilyn M. Bui , L. Brannon Thomas , Catherine P. Wilson , Lauren A. DeLand , Stephen M. Mastorides

The accurate segmentation and tracking of cells in microscopy image sequences is an important task in biomedical research, e.g., for studying the development of tissues, organs or entire organisms. However, the segmentation of touching…

Computer Vision and Pattern Recognition · Computer Science 2020-12-10 Tim Scherr , Katharina Löffler , Moritz Böhland , Ralf Mikut

Neural Cellular Automata (NCA) offer a robust and interpretable approach to image classification, making them a promising choice for microscopy image analysis. However, a performance gap remains between NCA and larger, more complex…

Computer Vision and Pattern Recognition · Computer Science 2025-08-19 Chen Yang , Michael Deutges , Jingsong Liu , Han Li , Nassir Navab , Carsten Marr , Ario Sadafi

Histopathology refers to the examination by a pathologist of biopsy samples. Histopathology images are captured by a microscope to locate, examine, and classify many diseases, such as different cancer types. They provide a detailed view of…

Image and Video Processing · Electrical Eng. & Systems 2020-11-12 Naira Elazab , Hassan Soliman , Shaker El-Sappagh , S. M. Riazul Islam , Mohammed Elmogy

Data sharing in the medical image analysis field has potential yet remains underappreciated. The aim is often to share datasets efficiently with other sites to train models effectively. One possible solution is to avoid transferring the…

Image and Video Processing · Electrical Eng. & Systems 2025-02-25 Muyang Li , Can Cui , Quan Liu , Ruining Deng , Tianyuan Yao , Marilyn Lionts , Yuankai Huo

Training of neural networks for automated diagnosis of pigmented skin lesions is hampered by the small size and lack of diversity of available datasets of dermatoscopic images. We tackle this problem by releasing the HAM10000 ("Human…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Philipp Tschandl , Cliff Rosendahl , Harald Kittler

The rising incidence of skin cancer, coupled with limited public awareness and a shortfall in clinical expertise, underscores an urgent need for advanced diagnostic aids. Artificial Intelligence (AI) has emerged as a promising tool in this…

Computer Vision and Pattern Recognition · Computer Science 2025-05-15 Hamideh Khaleghpour , Brett McKinney

Despite fluorescent cell-labelling being widely employed in biomedical studies, some of its drawbacks are inevitable, with unsuitable fluorescent probes or probes inducing a functional change being the main limitations. Consequently, the…

Quantitative Methods · Quantitative Biology 2020-03-03 Yan Ge , Philipp Rosendahl , Claudio Durán , Nicole Töpfner , Sara Ciucci , Jochen Guck , Carlo Vittorio Cannistraci

Our goal is to bridge human and machine intelligence in melanoma detection. We develop a classification system exploiting a combination of visual pre-processing, deep learning, and ensembling for providing explanations to experts and to…

Computer Vision and Pattern Recognition · Computer Science 2021-03-10 Ellák Somfai , Benjámin Baffy , Kristian Fenech , Changlu Guo , Rita Hosszú , Dorina Korózs , Fabrizio Nunnari , Marcell Pólik , Daniel Sonntag , Attila Ulbert , András Lőrincz

The examination of blood samples at a microscopic level plays a fundamental role in clinical diagnostics, influencing a wide range of medical conditions. For instance, an in-depth study of White Blood Cells (WBCs), a crucial component of…

Computer Vision and Pattern Recognition · Computer Science 2023-12-27 Satoshi Tsutsui , Winnie Pang , Bihan Wen

We propose a 3D convolutional neural network to simultaneously segment and detect cell nuclei in confocal microscopy images. Mirroring the co-dependency of these tasks, our proposed model consists of two serial components: the first part…

Image and Video Processing · Electrical Eng. & Systems 2018-09-07 Sundaresh Ram , Vicky T. Nguyen , Kirsten H. Limesand , Mert R. Sabuncu

Combining experiments with artificial intelligence algorithms, we propose a new machine learning based approach to extract the cellular force distributions from the microscope images. The full process can be divided into three steps. First,…

Artificial intelligence is nowadays used for cell detection and classification in optical microscopy, during post-acquisition analysis. The microscopes are now fully automated and next expected to be smart, to make acquisition decisions…

Automatic detection and tracking of cells in microscopy images are major applications of computer vision technologies in both biomedical research and clinical practice. Though machine learning methods are increasingly common in these…

Computer Vision and Pattern Recognition · Computer Science 2023-12-07 Nikomidisz Eftimiu , Michal Kozubek

Learning-based image quality assessment (IQA) has made remarkable progress in the past decade, but nearly all consider the two key components -- model and data -- in isolation. Specifically, model-centric IQA focuses on developing…

Computer Vision and Pattern Recognition · Computer Science 2023-12-11 Peibei Cao , Dingquan Li , Kede Ma
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